Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 733 a.a., multimodular transpeptidase-transglycosylase PbpC from Caulobacter crescentus NA1000

 Score =  229 bits (584), Expect = 4e-64
 Identities = 168/528 (31%), Positives = 256/528 (48%), Gaps = 25/528 (4%)

Query: 189 PEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFLSSD 248
           P  +  A L  EDR FYQH  +    I RA  +N +AG+T QG STLTQQLAK +FL+ D
Sbjct: 160 PNYVPMAFLAAEDRRFYQHGAIDVQGIARAAWINWRAGKTRQGASTLTQQLAKGLFLTPD 219

Query: 249 RTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQPLQE 308
           R + RKL+E  +A  ++   +KD ILE YLN +Y G +G   I G   AS+ YFG+P  +
Sbjct: 220 RVVKRKLQEMLLAYKLEQILTKDEILELYLNRIYFG-AGTYGIDG---ASQTYFGKPASQ 275

Query: 309 LRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRPLDV 368
           L + + ALL  + K PS     R  ERA  R  L+L  M +   +T  +  +A+    D 
Sbjct: 276 LTLSEAALLASLPKAPSRLALTRDMERALARSRLILANMRKEGWITPEQESRALD---DT 332

Query: 369 QKTAQIASRQPA-YFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQIPQ 427
            + + +A +    Y   +     E +    +    L V  ++DP+ QS+  + +   +  
Sbjct: 333 PRLSPMALQDEGDYGWVLDYATAEAVKIAGQNAPDLVVRLTIDPLLQSEGAEVVRQTM-- 390

Query: 428 LAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTAL 487
             +T       AA+      G IRAMVGG       FNR + A RQ GS  KP VY  A+
Sbjct: 391 ATETTRSGASQAALLSLSADGAIRAMVGGTDYSESPFNRAVQAKRQPGSTFKPFVYAAAV 450

Query: 488 AHPDQYNLATTLE-DKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGM 546
              ++  L T +  D+P+         W P NY   YRG + +  AL  S+N   V LG 
Sbjct: 451 ---EKGVLPTDMRVDEPVKF-----GTWEPENYSGGYRGPMTVEDALVTSINTVAVKLGQ 502

Query: 547 KLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRS 606
           ++G   +   + + G+      P  S+ LGS+ +   Q+   +Q     G +     + S
Sbjct: 503 EVGGPAIGDLVRRFGITSLPPSPDLSVALGSYEVNLLQITSGFQVFQQGGLRIEPYVIES 562

Query: 607 VLDLEGNVLYESLPRVSQ--AVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAALAGKTG 664
           +    G  +++  P   +    D   A +    MK+ V +GT +   A F    +AGKTG
Sbjct: 563 ITTQGGQQIFQHQPPQGERRVYDVAHASMMVKMMKKVVTQGTAQ--RAAF-GRPVAGKTG 619

Query: 665 TTNDNRDSWFVGVDGREVTTIWLGRDDNQP-TKLTGASGALRVYAQYL 711
           T+ + RD+WFVG     VT +W+G DD +P  K+ G      ++ +++
Sbjct: 620 TSQNWRDAWFVGFTPDYVTGVWVGNDDEKPMNKVVGGDIPASIWRRFM 667