Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 789 a.a., multimodular transpeptidase-transglycosylase PbpY from Caulobacter crescentus NA1000

 Score =  155 bits (392), Expect = 8e-42
 Identities = 96/263 (36%), Positives = 149/263 (56%), Gaps = 10/263 (3%)

Query: 176 SPEQRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLK---AGRTVQGG 232
           S E+R+F+  DQ P  L  A L  EDR+F+QH GV    + RAM+ N+     GR ++GG
Sbjct: 68  SKERRIFIPYDQIPPQLAQAFLAAEDRNFFQHGGVDVGGLSRAMIKNVGNAVRGRRLEGG 127

Query: 233 STLTQQLAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIH 292
           ST+TQQ+AKN+ L+SD T+ RK +EA +A  ++   +K +ILE YLNE++LG        
Sbjct: 128 STITQQVAKNVLLTSDATVGRKFKEAILAHRLEQSLTKQQILELYLNEIWLGYRS----F 183

Query: 293 GFGLASRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDI 352
           G G A+  YFG+ L +L + + A L  + KGP  Y+P+R   +A  RR+ VL  M E   
Sbjct: 184 GVGAAAYNYFGKALPDLTLAECAYLASLPKGPDNYHPIRNRAKAITRRNWVLGQMAEQGW 243

Query: 353 LTAPEYQQAVTRPLDVQKTAQIASRQPA--YFQQVSIELKEKLGDKFKADSGLRVFTSLD 410
           ++  + Q+A+  PL VQ   + A+ + A  + ++V       LG +   + G  + T+LD
Sbjct: 244 VSKADAQKAMAEPLVVQAAPKRAAYRDADYFVEEVRQRGMATLGPRLN-EGGYYMRTTLD 302

Query: 411 PVSQSKLEQAIHDQIPQLAKTAG 433
           P  Q+    A+ D + +  +  G
Sbjct: 303 PRLQTAARVALMDGLEKYDRRHG 325



 Score =  150 bits (379), Expect = 3e-40
 Identities = 97/299 (32%), Positives = 149/299 (49%), Gaps = 27/299 (9%)

Query: 436 LEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTALAHPDQYNL 495
           +  A +A++ ++G I A+VGG       FNR   A RQ GS  KP VY  AL +   Y  
Sbjct: 417 VNGALVAMEPYTGRIVALVGGYSYSLSNFNRATQAMRQPGSSFKPFVYAAALENG--YTP 474

Query: 496 ATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGMKLGIDQVSA 555
           A+ + D  +T KG+ G  W+P NY +++ G  PL   L QS+N  TV L   +G+ ++  
Sbjct: 475 ASVIVDSAITFKGANGEEWSPENYHKEFYGAQPLRKGLEQSINAMTVRLAQGVGMKKIVD 534

Query: 556 TLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRSVLDLEGNVL 615
              + GV RD + PV +M LG+   TP+++   Y    N G++     +  V D EG V+
Sbjct: 535 FAKRTGVVRD-MDPVLAMALGAGETTPFKLTAAYAPFVNGGRRVEPHLIELVQDREGKVI 593

Query: 616 Y----------------ESLPRVS----QAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFS 655
           +                +  PR +    Q +D   A+  T  ++  VQ GT     A   
Sbjct: 594 FRADKRDCERCEAGFNGDESPRFAAPGEQVMDPITAYQVTSMLQGVVQRGTA--AAASSL 651

Query: 656 SAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQP--TKLTGASGALRVYAQYLK 712
              LAGKTGTTN+ R +WFVG     +  +++G DDN+      TGA+G + ++  ++K
Sbjct: 652 GRPLAGKTGTTNEYRSAWFVGYSPNLIVGVFIGFDDNRSLGDGETGATGPVPMFMDFMK 710