Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 784 a.a., penicillin-binding protein from Bifidobacterium breve UCC2003

 Score =  155 bits (393), Expect = 6e-42
 Identities = 137/530 (25%), Positives = 234/530 (44%), Gaps = 18/530 (3%)

Query: 178 EQRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQ 237
           + R  +  +  P+ + +A++ +E+R FY   G+    I RA + N+  G T QGGST+TQ
Sbjct: 127 QNREIISCEGLPDYVGNAIVASENRTFYTDKGLDLKGIARAFINNVTKG-TRQGGSTITQ 185

Query: 238 QLAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLA 297
           Q A+  ++    +   K REA MA+ I    SKD +L  Y+N +YLG++     +G   A
Sbjct: 186 QYAERYYMGETTSYVGKAREAIMAIKIAQTESKDEVLCNYMNTIYLGRNS----YGIQAA 241

Query: 298 SRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPE 357
           ++ YF +  ++L + + A++ G++  PS ++P    + A+ R   VL +M E   +TA +
Sbjct: 242 AKSYFNKDAKDLTLSEAAMIAGIIPSPSTWDPADNPDMAKARFKRVLNIMQEDGYITAKD 301

Query: 358 YQQA-VTRPLDVQKTAQIASRQPAYFQQVSIEL-KEKLGDKFKADSG-LRVFTSLDPVSQ 414
           ++ A   +  DV +  + A         V  EL   K   K   D+G  ++ T++D   Q
Sbjct: 302 HKAAEFPQTADVTQQNEYAGPNGYLLDMVRRELVASKTFTKEDLDTGGYKIVTTIDKAKQ 361

Query: 415 SKLEQAIHDQIPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQI 474
             + Q++ D     A    + ++   IAV++ +G + ++  G        N    A  + 
Sbjct: 362 DAM-QSVGDT---RADGMPESIQVGGIAVEQKTGAVVSVYAGSDYLTQQLNNADQAMFEP 417

Query: 475 GSLVKPAVYLTALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALA 534
           GS +KP   L A       N  T       + +   G      N      G + LY A A
Sbjct: 418 GSTMKPFALLGAAQ--SGVNFDTMFNGN--SHQHFSGITAEVNNALNINWGNINLYQATA 473

Query: 535 QSLNVPTVALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTN 594
            S+N   + +   L   + +    + G+  +        +LG  +LT + +AQ + T+ N
Sbjct: 474 NSVNTVFMNVNEHLTPQRTAKIAHEAGIEGEIDTSSMYNVLGINALTVWDLAQGHSTIAN 533

Query: 595 SGKKAPLSALRSVLDLEGNVLYESLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQF 654
           +G K  L  +  VL  +   L+ +     Q  D     L   AM+     GT   +++  
Sbjct: 534 NGVKNTLHMVNKVLSSDNKDLHNAPNENKQVFDANDCALVQKAMQGTTTYGTAAGVSSAL 593

Query: 655 SSAALAGKTGTTNDNRDSWFVGVDGR--EVTTIWLGRDDNQPTKLTGASG 702
               +AGK+GT ND   + FVG       V  IW    D  P  +    G
Sbjct: 594 GGRQVAGKSGTANDELAASFVGYTPSLLNVWAIWNPDADGNPQVVPAFGG 643