Pairwise Alignments

Query, 820 a.a., ATP-dependent helicase HrpB from Vibrio cholerae E7946 ATCC 55056

Subject, 838 a.a., ATP-dependent helicase HrpB from Pseudomonas fluorescens FW300-N2E2

 Score =  634 bits (1634), Expect = 0.0
 Identities = 369/845 (43%), Positives = 514/845 (60%), Gaps = 40/845 (4%)

Query: 1   MSPLPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFHGK-IIMLEPRRL 59
           M  LPI EV+P L   + +  + +L+A PGAGK+T  PL LL      G+ I+MLEPRRL
Sbjct: 1   MISLPIDEVLPALRQALASRHEAVLEAPPGAGKTTRVPLALLNEPWLAGQTILMLEPRRL 60

Query: 60  AARNIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDV 119
           AAR  A  LA +L E+VG+ VGYR+R +++V   T++E+VTEGI+TR LQ+DP L+GV +
Sbjct: 61  AARAAAERLASELKEKVGETVGYRIRLDSKVGPKTRIEVVTEGILTRRLQDDPALEGVGL 120

Query: 120 LIFDEFHERSIHADTALALALEVQSALRED--LKIVVMSATLDQQALQNLLPQASYVESQ 177
           LIFDEFHERS+ AD ALAL+L  +   RED  LKI++MSATL+ + L  LL  A  + S+
Sbjct: 121 LIFDEFHERSLDADLALALSLNGRELFREDQPLKILLMSATLEGERLAGLLDNAPILRSE 180

Query: 178 GRGFPIEIRY-QPLRSDEPLVTAMQRQIRHLLQHETGSLLAFLPGAASINQLTEQLSDLA 236
           GR FP+ +R+ +P +  E +   + + +   L  ETGS+L FLPG A I ++ +QL++  
Sbjct: 181 GRMFPVTVRWGRPFQPGEFIEPRLVQTVLEALHDETGSVLVFLPGQAEIRRVHQQLAEAL 240

Query: 237 SE---VEICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLER 293
            E   V +CPL+G+++ AAQ+ AI P   G+RKVVLATNIAETSLTI G+R+V+D+GL R
Sbjct: 241 GEGGNVLLCPLHGELDLAAQRAAIDPAPPGQRKVVLATNIAETSLTINGVRVVIDAGLAR 300

Query: 294 SARFDLKTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLH 353
             RFD  +G+TRL+  RI+++SA QRAGRAGRLEPG+C RL+SE Q +Q       E+L 
Sbjct: 301 VPRFDPGSGMTRLDTQRISRASATQRAGRAGRLEPGVCYRLWSEDQHEQLAAYGSAEILS 360

Query: 354 TDLAPLALELAQWGAQPSDLAWLNLPPSSAFAQAQQLLQRLGLLDARTQITAAGKEAHLL 413
            DLA LAL+L +WG  P+ L WL++PP++A+AQAQ LLQRLG L+   Q+T  G+    L
Sbjct: 361 ADLAGLALQLGRWGVTPAQLVWLDIPPTAAYAQAQDLLQRLGALEGE-QLTRHGQAMAEL 419

Query: 414 GVEPRIAAMLLSADRLGESALQSALALTV------------------LLEEPERQVIDVQ 455
              PRIA +LL    LG + +   +A  +                  LL   ER     Q
Sbjct: 420 PAHPRIAHLLLRGQALGLADMACNVAALLGERDILRGAGADLHSRLALLSGEERAARGAQ 479

Query: 456 HSLHRWQQGRHPKQKLLIQRAQSLAHKLDTAFSLSSVDSAWLPLVACLAFPDRIAQQRGQ 515
             + R +Q     +  L  +A+      D           WL  +  LA+PDR+AQQR  
Sbjct: 480 GGVQRARQLARQYRGYLRGKAEEAVADPD--------HPRWLGALLALAYPDRVAQQRRP 531

Query: 516 QTGQFLLANGHGAWLAVEDRLSAADYLVALDLMRGQTQASQ-IFSALELDIHALERVLPA 574
              ++ LANG  A  A  D L    +LV  DL   Q Q  + I+ A + D    + VL  
Sbjct: 532 GGAEYRLANGRAALFAEADSLMKQAWLVIADLGSRQGQREERIYLATDFDPALFDSVLAE 591

Query: 575 LISRVEQVDWDEKAGRLSAEAQWRIDQLVLRREKLPEPDKQKMTQALLSYVRRKGLTVLQ 634
            +  V+Q+DWDE+ G L AE Q ++ +LVL RE L   D+   +QAL++ VRRKGL +L 
Sbjct: 592 QVHTVDQLDWDEREGVLRAERQRKVGELVLSREPLTGLDESARSQALVNLVRRKGLELLP 651

Query: 635 WSEDASEWLARA----RCAAEWLPEEAWPALDDETLLARLELWLEPYLAGVTSVKGLQSV 690
           W+ +  +W AR     R   +   E  WP + D  LL  LE WL PYL  V+ +    ++
Sbjct: 652 WTPELRQWQARVALLRRLDLDAKGESQWPDVSDSALLGSLEHWLMPYLGRVSRLSHFANL 711

Query: 691 SVLQALKHYLGWELSQQLDEWLPTHHLLPTGNHKKIRYQLGMEPTLSVRMQEVFGEQSSP 750
            +   + + L W L Q+LDE  P H  +P+G+  ++ Y     P L+VR+QE+FG   +P
Sbjct: 712 DLSSVVHNLLPWPLPQRLDELAPHHLSVPSGSSIRLDYS-EHPPILAVRLQELFGLADTP 770

Query: 751 RVAKGTRAVVMELLSPAQRPLQVTRDLASFWAGAYKEVQKEMKGRYPKHVWPDDPANHVA 810
           R+A G + V + LLSPA+RP+QVT+DLA+FW   Y EV+K++KGRYPKH WPDDP    A
Sbjct: 771 RIAGGRQVVKLHLLSPARRPVQVTQDLANFWRSTYAEVKKDLKGRYPKHYWPDDPLVAEA 830

Query: 811 TSKTK 815
           T++ K
Sbjct: 831 TARVK 835