Pairwise Alignments

Query, 820 a.a., ATP-dependent helicase HrpB from Vibrio cholerae E7946 ATCC 55056

Subject, 716 a.a., ATP-dependent helicase HrpB from Pseudomonas stutzeri RCH2

 Score =  491 bits (1263), Expect = e-143
 Identities = 298/713 (41%), Positives = 423/713 (59%), Gaps = 27/713 (3%)

Query: 127 ERSIHADTALALALEVQSALRE-DLKIVVMSATLDQQALQNLLPQASYVESQGRGFPIEI 185
           ERS+ AD ALAL L  +  LR+  LK+++MSATL+ Q L  LL  A  V S+GR  P+  
Sbjct: 3   ERSLDADLALALTLNARQLLRDVPLKLLLMSATLEGQRLSALLDDAPVVRSEGRMHPVAQ 62

Query: 186 RY-QPLRSDEPLVTAMQRQIRHLLQHETGSLLAFLPGAASINQLTEQLSDLAS---EVEI 241
           R+ + L   E +   + + +   L+ E GS+L FLPG   I ++ E L+D  S   ++ +
Sbjct: 63  RWGRQLAPGERIEPRVVQTVLQALEEEHGSVLVFLPGQGEIRRVNEALADQLSGRSDILL 122

Query: 242 CPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDLKT 301
           CPL+G++E A Q+ AI P  +G RKVVLATNIAETSLTIEG+R+V+D+GL R  RFD  +
Sbjct: 123 CPLHGELELAQQRAAIEPAPSGMRKVVLATNIAETSLTIEGVRVVVDAGLARVPRFDPGS 182

Query: 302 GITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLHTDLAPLAL 361
           G+TRLE  RI+++SA QRAGRAGRLEPGIC RL+SE Q  Q     E E+L  DLA +AL
Sbjct: 183 GMTRLETRRISRASATQRAGRAGRLEPGICYRLWSEDQHAQLAAYGEAEILQADLAGVAL 242

Query: 362 ELAQWGAQPSDLAWLNLPPSSAFAQAQQLLQRLGLL----DARTQITAAGKEAHLLGVEP 417
           +LA+WG +P +LAWL+ PP++A+AQ+Q LL+RLG L        Q+T+ G+    L   P
Sbjct: 243 QLARWGVEPDELAWLDRPPAAAYAQSQALLERLGALLRNQRGSWQLTSHGQAMAELPAHP 302

Query: 418 RIAAMLLSADRLGESALQSALALTVLLEEPERQV-------IDVQHSLHRWQQGRH---P 467
           R+A MLL    +G + L + +A   LL E + Q         D+   LH+ Q GR     
Sbjct: 303 RLAHMLLRGQAMGVAVLAADVA--ALLVERDIQSGGQRGGGADLALRLHQLQDGRGAGVQ 360

Query: 468 KQKLLIQRAQSLAHKLDTAFSLSSVDSAWLPLVACLAFPDRIAQQRGQQTGQFLLANGHG 527
           + + L ++ +SL      A +    +   L  +   A+PDR+A+QR +  G + LANG  
Sbjct: 361 RVRQLARQFRSLLRGAAAAPTAELDERQALAALLAFAYPDRVARQRREGGGGYRLANGRA 420

Query: 528 AWLAVEDRLSAADYLVALDLMRGQTQASQ-IFSALELDIHALERVLPALISRVEQVDWDE 586
           A     D L    +LV  +L   Q Q  + I+ A+ LD    +  L   ++  ++++WDE
Sbjct: 421 AQFGEPDALMKEPWLVIAELGSHQGQREERIYRAVALDPMLFDGPLAEQVALRDELEWDE 480

Query: 587 KAGRLSAEAQWRIDQLVLRREKLPEPDKQKMTQALLSYVRRKGLTVLQWSEDASEWLARA 646
           + G L AE Q R+ +LVL  E LP  D++   +ALL  VRRKGL +L W+ +  +W AR 
Sbjct: 481 REGVLRAERQRRVGELVLSSEPLPSLDEEARGRALLGLVRRKGLELLPWTPELRQWQARI 540

Query: 647 RC--AAEWLP--EEAWPALDDETLLARLELWLEPYLAGVTSVKGLQSVSVLQALKHYLGW 702
                 +  P  +  WP + D  LL RL+ WL PYL  VT +     + +   L   L W
Sbjct: 541 GLLRQLDLAPGNDSEWPDVSDAALLERLDDWLLPYLGKVTRLAHFAQLDLAAMLATLLPW 600

Query: 703 ELSQQLDEWLPTHHLLPTGNHKKIRYQLGMEPTLSVRMQEVFGEQSSPRVAKGTRAVVME 762
            L Q+L+E  P    +P+ +  ++ Y     P L+VR+QE+FG   +PR+A G + V + 
Sbjct: 601 PLPQRLEEQAPVAVTVPSDSRIRLDYS-EQPPVLAVRLQELFGLADTPRIAAGRQVVKLH 659

Query: 763 LLSPAQRPLQVTRDLASFWAGAYKEVQKEMKGRYPKHVWPDDPANHVATSKTK 815
           LLSPA+RP+QVT+DLASFWA  Y EV+K++KGRYPKH WPDDP     T++ K
Sbjct: 660 LLSPARRPVQVTQDLASFWANTYAEVKKDLKGRYPKHYWPDDPLIAEPTARAK 712