Pairwise Alignments

Query, 820 a.a., ATP-dependent helicase HrpB from Vibrio cholerae E7946 ATCC 55056

Subject, 844 a.a., ATP-dependent helicase HrpB from Pseudomonas syringae pv. syringae B728a

 Score =  622 bits (1605), Expect = 0.0
 Identities = 371/849 (43%), Positives = 507/849 (59%), Gaps = 43/849 (5%)

Query: 1   MSPLPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFHGK-IIMLEPRRL 59
           M+ LPI  V+P L   ++   + +L+A PGAGK+T  PL LL+     G+ I+MLEPRRL
Sbjct: 1   MTSLPIDSVLPALRQALSTRHEAVLEAPPGAGKTTRVPLALLEETWLAGQTILMLEPRRL 60

Query: 60  AARNIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDV 119
           AAR  A  LA +LGE+VG+ VGYR+R E+RV   T++E+VTEGI+TR LQ+DP L+GV +
Sbjct: 61  AARAAAERLASELGEKVGETVGYRIRLESRVGPKTRIEVVTEGILTRRLQDDPALEGVGL 120

Query: 120 LIFDEFHERSIHADTALALALEVQSALRED--LKIVVMSATLDQQALQNLLPQASYVESQ 177
           LIFDEFHERS+ AD ALAL+L  +   R+D  LKI++MSATL+ + L  LL  A  V S 
Sbjct: 121 LIFDEFHERSLDADLALALSLNGRELFRDDQPLKILLMSATLEGERLAALLDDAPVVRSD 180

Query: 178 GRGFPIEIRY-QPLRSDEPLVTAMQRQIRHLLQHETGSLLAFLPGAASINQLTEQLSDLA 236
           GR FP+ +++ +P +  E +   + + +   L  E+GSLL FLPG A I ++ +QL++  
Sbjct: 181 GRMFPVSMQWGRPFQPGEFVEPRVVQTVLDALGSESGSLLVFLPGQAEIRRVNQQLAEAL 240

Query: 237 SE---VEICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLER 293
            E   + +CPL+G+++  AQ+ AI P   G RKVVLATNIAETSLTI+G+R+V+D+GL R
Sbjct: 241 GERADILLCPLHGELDLNAQRAAIEPAPKGTRKVVLATNIAETSLTIDGVRVVIDAGLAR 300

Query: 294 SARFDLKTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLH 353
             RFD  +G+TRLE  RI+++SA QRAGRAGRLEPG+C RL+SEAQ  Q       E+L 
Sbjct: 301 VPRFDPGSGMTRLETQRISRASATQRAGRAGRLEPGVCYRLWSEAQHDQLAAYGAAEILQ 360

Query: 354 TDLAPLALELAQWGAQPSDLAWLNLPPSSAFAQAQQLLQRLGLLDAR----TQITAAGKE 409
            DLA LAL+LA+WG  P+ L WL++PP++A+AQAQ LL RL  L+ +      +T  G+ 
Sbjct: 361 ADLAGLALQLARWGVTPAQLVWLDVPPAAAYAQAQDLLVRLEALNNQPGQPPALTPHGQA 420

Query: 410 AHLLGVEPRIAAMLLSADRLGESALQSALALTV------------------LLEEPERQV 451
              L   PRIA +LL    LG   L   +A  +                  LL   ER  
Sbjct: 421 MAELPAHPRIAHLLLRGHALGLGELACDVAALLAERDILRGAGADLHSRLTLLAGTERAA 480

Query: 452 IDVQHSLHRWQQGRHPKQKLLIQRAQSLAHKLDTAFSLSSVDSAWLPLVACLAFPDRIAQ 511
              Q  + R +Q     +  L   A S     D         S WL  +  LA+PDR+AQ
Sbjct: 481 RGAQGGVQRARQLSRQYRGYLRGAANSPVSDPD--------HSRWLGALLALAYPDRVAQ 532

Query: 512 QRGQQTGQFLLANGHGAWLAVEDRLSAADYLVALDLMRGQTQASQ-IFSALELDIHALER 570
           QR     ++ LANG  A  A  D L    +LV  DL   Q Q  + I+ A E D    + 
Sbjct: 533 QRRAGGAEYRLANGRAALFAEADALMKQPWLVIADLGSRQGQREERIYLAAEFDPALFDS 592

Query: 571 VLPALISRVEQVDWDEKAGRLSAEAQWRIDQLVLRREKLPEPDKQKMTQALLSYVRRKGL 630
           VL   +  V+Q+DWDE+ G   AE Q ++ +L++ RE L   D    + ALL+ VRRKGL
Sbjct: 593 VLAEQVISVDQIDWDEREGVFRAERQRKVGELIISREPLTGLDDATRSHALLALVRRKGL 652

Query: 631 TVLQWSEDASEWLARARCA----AEWLPEEAWPALDDETLLARLELWLEPYLAGVTSVKG 686
            +L W+ +  +W AR         E      WP L D  LLA LE WL PYL  VT +  
Sbjct: 653 ELLPWTAELRQWQARVALLRGLDIEKSSASEWPDLSDAQLLATLENWLMPYLGKVTRLSH 712

Query: 687 LQSVSVLQALKHYLGWELSQQLDEWLPTHHLLPTGNHKKIRYQLGMEPTLSVRMQEVFGE 746
              + +   L++ L W L QQL+   P    +P+G++ +I Y     P LSVR+QE+FG 
Sbjct: 713 FSQLDLSSILRNLLPWPLPQQLEAQAPQTLQVPSGSNIRIDYS-EHPPILSVRLQELFGL 771

Query: 747 QSSPRVAKGTRAVVMELLSPAQRPLQVTRDLASFWAGAYKEVQKEMKGRYPKHVWPDDPA 806
             +PR+A G + + + LLSPA+RP+QVT+DLA+FW   Y EV+K++KGRYPKH WPDDP 
Sbjct: 772 SDTPRIANGRQVLKLHLLSPARRPVQVTQDLANFWRSTYIEVKKDLKGRYPKHYWPDDPL 831

Query: 807 NHVATSKTK 815
              AT++ K
Sbjct: 832 VAEATARVK 840