Pairwise Alignments

Query, 820 a.a., ATP-dependent helicase HrpB from Vibrio cholerae E7946 ATCC 55056

Subject, 1303 a.a., ATP-dependent helicase HrpA from Pseudomonas syringae pv. syringae B728a

 Score =  258 bits (658), Expect = 2e-72
 Identities = 169/480 (35%), Positives = 258/480 (53%), Gaps = 29/480 (6%)

Query: 4   LPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAG-GFHGKIIMLEPRRLAAR 62
           LPI     ++   +     LI+    G+GK+T  P   L+ G G HG I   +PRR+AAR
Sbjct: 72  LPIAAKRDEIKEALLKHQVLIIAGETGSGKTTQLPKICLEIGRGQHGLIGHTQPRRIAAR 131

Query: 63  NIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLIF 122
           ++A  +A+++G  +G  VGY+VR E++    T ++++T+GI+    Q+D  L+  D +I 
Sbjct: 132 SVASRVAEEIGTPLGALVGYQVRFEDQSDSNTLIKLMTDGILLAETQHDRFLERYDTIIV 191

Query: 123 DEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGRGFP 182
           DE HERS++ D  L   L+     R DLK+++ SAT+D Q        A  +E  GR FP
Sbjct: 192 DEAHERSLNIDFLLGY-LKTLLPRRPDLKVIITSATIDLQRFSEHFNDAPVIEVSGRTFP 250

Query: 183 IEIRYQPLRSDEP-----------LVTAMQRQIRHLLQHET------GSLLAFLPGAASI 225
           +++ Y+PL S++            +  A+   +  L   E       G +L FLPG   I
Sbjct: 251 VDVWYRPLTSEQDEDGNSVEEDLTVDQAILATLDELAAFERSERKSPGDVLVFLPGEREI 310

Query: 226 NQLTEQLSDLA-SEVEICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIR 284
               E L        EI PLY ++  A QQR I  +  GRR VVLATN+AETSLT+ GIR
Sbjct: 311 RDAAEVLRKAQLKHTEILPLYARLSPAEQQR-IFQSHPGRR-VVLATNVAETSLTVPGIR 368

Query: 285 IVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQP 344
            V+D+G  R +R+  +  + RL    ++Q+SA QR GR GR+EPG+CVRLYSE     +P
Sbjct: 369 YVIDTGTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGLCVRLYSEEDFNGRP 428

Query: 345 WVPEPEMLHTDLAPLALELAQWG-AQPSDLAWLNLPPSSAFAQAQQLLQRLGLLDARTQI 403
              +PE+L T+LA + L++      + +D  ++  P   A +    LLQ L  ++   Q+
Sbjct: 429 EFTDPEILRTNLAAVILQMLHLRLGEITDFPFIEPPDGKAISDGFNLLQELSAVNRENQL 488

Query: 404 TAAGKEAHLLGVEPRIAAMLLSADRLGE----SALQSALALTVLLEEP--ERQVIDVQHS 457
           T  G++   L V+PR+  MLL A + G       + SA+++  + E P   +Q  D  H+
Sbjct: 489 TPLGRQLARLPVDPRMGRMLLEAAKQGSLQEVLIVASAMSVQDVRERPPERQQAADQAHA 548