Pairwise Alignments

Query, 820 a.a., ATP-dependent helicase HrpB from Vibrio cholerae E7946 ATCC 55056

Subject, 1320 a.a., ATP-dependent helicase HrpA from Dechlorosoma suillum PS

 Score =  249 bits (636), Expect = 7e-70
 Identities = 167/474 (35%), Positives = 260/474 (54%), Gaps = 24/474 (5%)

Query: 4   LPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAG-GFHGKIIMLEPRRLAAR 62
           LP+     ++ + I ++  +I+    G+GK+T  P   L+ G G  G I   +PRRLAAR
Sbjct: 84  LPVNGRREEIKALIEHNQVVIVCGETGSGKTTQLPKICLELGRGAAGLIGHTQPRRLAAR 143

Query: 63  NIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLIF 122
           ++A  +AQ+L  ++G  VG ++R ++R    + L+++T+GI+    Q DP L+  D +I 
Sbjct: 144 SVAARVAQELQTQIGAGVGVKIRFQDRSGPQSYLKLMTDGILLAETQTDPYLNAYDTIII 203

Query: 123 DEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQ----ASYVESQG 178
           DE HERS++ D  L   L+   A R+DLK+++ SAT+D +       Q    A  +E  G
Sbjct: 204 DEAHERSLNIDFLLGY-LKQLLAKRKDLKVIITSATIDAERFAQHFAQHGKPAPVIEVSG 262

Query: 179 RGFPIEIRYQPL------RSDEPLVTAMQRQIRHLLQHETGSLLAFLPGAASINQLTEQL 232
           R +P+E+RY+P+      + +  L  A+   +  L +   G +L FLPG   I +  E L
Sbjct: 263 RLYPVEVRYRPVTPLEEDQEERDLYDAIVDAVHELGREGPGDVLVFLPGEREIREAAEAL 322

Query: 233 SDL---ASEVEICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDS 289
                   + EI PL+ ++  AA+Q  +  T  GRR VVLATN+AETSLT+ GIR V+D+
Sbjct: 323 RKHHFPGPQPEILPLFSRLS-AAEQDRVFKTGGGRR-VVLATNVAETSLTVPGIRYVVDT 380

Query: 290 GLERSARFDLKTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPWVPEP 349
           GL R  R+  +  +  L+  R++Q++A QRAGR GR+  G+C+RLY EA    +    +P
Sbjct: 381 GLARVKRYSYRNKVEMLQVERVSQAAARQRAGRCGRVAAGVCIRLYDEADFNARGEFTDP 440

Query: 350 EMLHTDLAPLALEL-AQWGAQPSDLAWLNLPPSSAFAQAQQLLQRLGLLDARTQITAAGK 408
           E+L + LA + L + A          ++  PP  A      LLQ LG LD   ++T  G+
Sbjct: 441 EILRSSLAGVILRMKALKLTDVESFPFIEAPPPKAINDGYSLLQELGGLDEDNRLTDVGR 500

Query: 409 EAHLLGVEPRIAAMLLSADRLG--ESALQSALALTVL--LEEPER--QVIDVQH 456
               L ++PRIA M+++A   G  +  L  A AL+V    E P+   Q  D +H
Sbjct: 501 GLAKLPLDPRIARMIVAARDRGCLKEVLVIAAALSVQDPRERPQERLQAADEKH 554