Pairwise Alignments

Query, 820 a.a., ATP-dependent helicase HrpB from Vibrio cholerae E7946 ATCC 55056

Subject, 1300 a.a., ATP-dependent RNA helicase HrpA from Klebsiella michiganensis M5al

 Score =  250 bits (639), Expect = 3e-70
 Identities = 159/483 (32%), Positives = 258/483 (53%), Gaps = 24/483 (4%)

Query: 4   LPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAG-GFHGKIIMLEPRRLAAR 62
           LP+ +   ++L  + +   +I+    G+GK+T  P   ++ G G  G I   +PRRLAAR
Sbjct: 77  LPVSQKKQEILDAVRDHQVVIVAGETGSGKTTQLPKICMELGRGVKGLIGHTQPRRLAAR 136

Query: 63  NIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLIF 122
            +A  +A++L  E G  +GY+VR  + VS  T ++++T+GI+   +Q D  L   D +I 
Sbjct: 137 TVANRIAEELQTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196

Query: 123 DEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGRGFP 182
           DE HERS++ D  L    E+    R DLKI++ SAT+D +        A  +E  GR +P
Sbjct: 197 DEAHERSLNIDFLLGYLRELLPR-RPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255

Query: 183 IEIRYQPLRSDEPLVTAMQRQ-----IRHLLQHETGSLLAFLPGAASINQLTEQLSDL-A 236
           +E+RY+P+  D       Q Q     +  L +   G +L F+ G   I    + L+ L  
Sbjct: 256 VEVRYRPIVEDADDTERDQLQAIFDAVDELGRESPGDILIFMSGEREIRDTADALNKLNL 315

Query: 237 SEVEICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSAR 296
              E+ PLY ++  + Q R     A   R++VLATN+AETSLT+ GI+ V+D G  R +R
Sbjct: 316 RHTEVLPLYARLSNSEQNRVFQ--AHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISR 373

Query: 297 FDLKTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLHTDL 356
           +  +T + RL    ++Q+SA QR GR GR+  GIC+RLYSE     +P   +PE+L T+L
Sbjct: 374 YSFRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSRPAFTDPEILRTNL 433

Query: 357 APLALELAQWGAQPSDLA---WLNLPPSSAFAQAQQLLQRLGLLDARTQ-----ITAAGK 408
           A + L++   G    D+A   ++  P         +LL+ LG +    Q     +T  G+
Sbjct: 434 ASVILQMTALGL--GDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQQTAYKLTPMGR 491

Query: 409 EAHLLGVEPRIAAMLLSADRLGESALQSALALT--VLLEEPERQVIDVQHSLHRWQQGRH 466
           +   L V+PR+A M+L A + G   ++ A+ +T  + +++P  + +D Q +     +  H
Sbjct: 492 QLSQLPVDPRLARMVLEAQKHG--CVREAMIITSALSIQDPRERPMDKQQASDEKHRRFH 549

Query: 467 PKQ 469
            K+
Sbjct: 550 DKE 552