Pairwise Alignments

Query, 820 a.a., ATP-dependent helicase HrpB from Vibrio cholerae E7946 ATCC 55056

Subject, 809 a.a., ATP-dependent RNA helicase HrpB from Enterobacter sp. TBS_079

 Score =  760 bits (1963), Expect = 0.0
 Identities = 411/820 (50%), Positives = 564/820 (68%), Gaps = 17/820 (2%)

Query: 1   MSPLPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFHGKIIMLEPRRLA 60
           MS LP+  V+P+LL+ + ++PQ++L A  GAGKST+ PLQ+L+ G   GKII+LEPRRLA
Sbjct: 1   MSSLPVAVVLPELLAALHHAPQVLLNAPTGAGKSTWLPLQILKEGTVRGKIILLEPRRLA 60

Query: 61  ARNIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVL 120
           ARN+A+ LA+ LGE+ G+ VGYR+R E  V  +T+LE+VTEGI+TRMLQNDPEL+GV ++
Sbjct: 61  ARNVAQRLAELLGEKPGETVGYRMRAETCVGPSTRLEVVTEGILTRMLQNDPELNGVGLV 120

Query: 121 IFDEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGRG 180
           I DEFHERS+ AD ALAL L+VQ  LR+DL++++MSATLD + LQ  LP A  + S+GR 
Sbjct: 121 ILDEFHERSLQADLALALLLDVQQGLRDDLRLLIMSATLDNERLQQTLPDAPVIASEGRA 180

Query: 181 FPIEIRYQPLRSDEPLVTAMQRQIRHLLQHETGSLLAFLPGAASINQLTEQL-SDLASEV 239
           FP+E RYQPL + +    A+      LL+ E+GSLL FLPG   I ++ +QL S + S+V
Sbjct: 181 FPVERRYQPLPAHQRFDDAVAIATAELLRQESGSLLLFLPGVGEIQRVQDQLASRVGSDV 240

Query: 240 EICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDL 299
            +CPLYG +  A Q++AI P  AG+RKVVLATNIAETSLTIEGIR+V+DS  ER A FD 
Sbjct: 241 LLCPLYGALSLADQRKAILPAPAGQRKVVLATNIAETSLTIEGIRLVVDSAQERVASFDA 300

Query: 300 KTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLHTDLAPL 359
           +TG+T+L   RI+Q+S  QRAGRAGRLEPGIC+ L S  Q ++      PE+LH+DLA L
Sbjct: 301 RTGLTKLLTQRISQASMVQRAGRAGRLEPGICLHLTSAEQAERAAQQSTPEILHSDLAGL 360

Query: 360 ALELAQWGA-QPSDLAWLNLPPSSAFAQAQQLLQRLGLLDARTQITAAGKEAHLLGVEPR 418
            ++L QWG   P+ L WLN PP++  A A+ LL RLG LD   ++++ G++   LG +PR
Sbjct: 361 VMDLLQWGCPDPAQLTWLNPPPAANLAAARALLNRLGALDGE-RLSSRGQKMAALGNDPR 419

Query: 419 IAAMLLSADRLGESALQSALALTVLLEEPERQ-VIDVQHSLHRWQQGRHPKQKLLIQRAQ 477
           +AAML++A   GE  + +A  L  +LEEP R    D+  +  R  QG         QRAQ
Sbjct: 420 LAAMLVAAQ--GEDEIATAAKLAAILEEPPRGGSSDLAQAFSR-NQGNWQ------QRAQ 470

Query: 478 SLAHKLDTAFSLSSVDSAWLPLVACLAFPDRIAQQRGQQTGQFLLANGHGAWLAVEDRLS 537
            L  +L+      S DSA +  +   AFPDRIA++RG   G++ LANG GA L  +D ++
Sbjct: 471 QLCRRLNG--KAGSPDSAAIAPLLAQAFPDRIARRRGLD-GRYQLANGMGAMLDSDDAMT 527

Query: 538 AADYLVALDLMRGQ-TQASQIFSALELDIHALERVLPALISRVEQVDWDEKAGRLSAEAQ 596
             ++L+A  L++G  +  ++I  A+ +DI AL R  P L+ + + V+WDE  G L A  +
Sbjct: 528 RHEWLIAPLLLQGSHSPDARILQAIAVDIDALTRACPQLVQQSDTVEWDEAQGTLKAFRR 587

Query: 597 WRIDQLVLRREKLPEPDKQKMTQALLSYVRRKGLTVLQWSEDASEWLARARCAAEWLPEE 656
            +  +L+L    L +P ++ +  A+L+ +R KGL VL W+ +A ++  R  CAA WLPE 
Sbjct: 588 SQTGKLILGTTPLAKPSEEVLHLAMLNGIRDKGLGVLNWTPEAEQYRIRLHCAARWLPEY 647

Query: 657 AWPALDDETLLARLELWLEPYLAGVTSVKGLQSVSVLQALKHYLGWELSQQLDEWLPTHH 716
            WPA+DDETLL  LE WL P + GV S++ L+++ V  AL++ L W L Q+LD  LP H+
Sbjct: 648 DWPAVDDETLLGSLERWLLPQMHGVHSLRALKALDVKVALQNLLDWSLRQRLDSELPGHY 707

Query: 717 LLPTGNHKKIRYQLGMEPTLSVRMQEVFGEQSSPRVAKGTRAVVMELLSPAQRPLQVTRD 776
            +PTG+   IRY     P L+VRMQE+FGE ++P VA+G  ++V+ELLSPA RPLQ+TRD
Sbjct: 708 TVPTGSRIAIRYHEDNPPALAVRMQEMFGEATTPSVAQGRVSLVLELLSPAHRPLQITRD 767

Query: 777 LASFWAGAYKEVQKEMKGRYPKHVWPDDPANHVATSKTKR 816
           L +FWAG+Y++VQKEMKGRYPKHVWPDDPAN   T +TK+
Sbjct: 768 LGAFWAGSYRDVQKEMKGRYPKHVWPDDPANTAPTRRTKK 807