Pairwise Alignments

Query, 820 a.a., ATP-dependent helicase HrpB from Vibrio cholerae E7946 ATCC 55056

Subject, 847 a.a., ATP-dependent helicase HrpB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  562 bits (1449), Expect = e-164
 Identities = 334/837 (39%), Positives = 488/837 (58%), Gaps = 33/837 (3%)

Query: 6   IIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFHGK-IIMLEPRRLAARNI 64
           ++  +P+L   + ++ + +  A PGAGK+T  PL LL A     + I+MLEPRRLAAR  
Sbjct: 16  LVSALPRLTDALLSAGRCVFVAPPGAGKTTVVPLHLLDAPWLRSRRIVMLEPRRLAARAA 75

Query: 65  ARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLIFDE 124
           AR++A+ LGE+VG+ VGYR+R ++RV   T++E+VTEG++ RML +DP L+   ++IFDE
Sbjct: 76  ARFMARLLGEQVGETVGYRMRLDSRVGPRTRMEVVTEGVLGRMLHDDPTLEEYGLVIFDE 135

Query: 125 FHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGRGFPIE 184
           +HERS+ AD  LAL L+V  ALR+DL+++ MSATLD   L +L+     +E +GR +P+E
Sbjct: 136 YHERSLQADLGLALCLDVADALRDDLRLLAMSATLDAAPLGSLMGGCPVIECEGRQWPVE 195

Query: 185 IRYQPLRSDEPLVTAMQRQ----IRHLLQHETGSLLAFLPGAASINQLTEQLSDL-ASEV 239
           +RY P  +     ++ +      +   L    G +L FLPG   I +   +L  L A  V
Sbjct: 196 VRYAPPVNRAGYPSSFEDNVAACVHRALAETEGDVLVFLPGGGEIRRTARRLEGLDAHGV 255

Query: 240 EICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDL 299
            +  LYG +  A Q  A+AP  +G RKVVLAT +AETSLTIEG+R+V+D GL R +RFD 
Sbjct: 256 GVHMLYGDLAPALQDAALAPDVSGARKVVLATALAETSLTIEGVRVVVDGGLARFSRFDP 315

Query: 300 KTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLHTDLAPL 359
           ++G++RL   RI+ + A QR GRAGR  PG+C RL+ E +         PE+L  DLAPL
Sbjct: 316 QSGMSRLVTERISLAGATQRVGRAGRTGPGVCYRLWHEGETASLRPFARPEVLDADLAPL 375

Query: 360 ALELAQWGA-QPSDLAWLNLPPSSAFAQAQQLLQRLGLLDARTQITAAGKEAHLLGVEPR 418
            L+L+ WG   PS L WL+ PP     QA+ LLQ LG +DA  +IT  GK  + L + PR
Sbjct: 376 MLQLSAWGVLDPSKLRWLDAPPEVNVNQARILLQSLGAIDASGRITGHGKSMNALPLHPR 435

Query: 419 IAAMLLSADRLGESALQSALALTVLLEE---PERQV-IDVQHSLH------------RWQ 462
           +A M+LSA R G ++L  A  L  LLE+    ER    D++ S+               +
Sbjct: 436 LAHMVLSACRSGSASL--ACVLACLLEQRGVAERMPGCDIRPSVEDAVRRMRHKPRGASR 493

Query: 463 QGRHPKQKLLIQRAQSLAH-KLDTAFSLSSVDSAWLPLVACLAFPDRIAQQRGQQTGQFL 521
           +G   +    + R  +LA  +LD   +LS  D A   ++   AFPDR+A   G+  G F 
Sbjct: 494 EGWEVRLASSVDRIAALAGVRLDAGRALS--DVARCGVLLGFAFPDRVAMNTGE--GTFR 549

Query: 522 LANGHGAWLAVEDRLSAADYLVALDLMRGQTQASQIFSALELDIHALERVLPALISRVEQ 581
           L+ G GA +  +D L+   +LVA +L  G    ++I+ A  L    +  +    I+   +
Sbjct: 550 LSCGRGAAVPADDALAREPFLVAAEL-DGDVTRARIWRAAPLAAEEVAMLAGGAITEQRE 608

Query: 582 VDWDEKAGRLSAEAQWRIDQLVLRREKLPEPDKQKMTQALLSYVRRKGLTVLQWSEDASE 641
           V WD++ G   A  + R   LVL R ++ + D   +  A++  +R +GL  L W+++  +
Sbjct: 609 VGWDDRQGVAVAHVERRFGALVLERRRIDDVDDTLLAHAVMRGIRTRGLRCLPWTQELRQ 668

Query: 642 WLARARCAAEW-LPEEAWPALDDETLLARLELWLEPYLAGVTSVKGLQSVSVLQALKHYL 700
           W AR         P   WP + D  L A LE WL P+L+G+   +    + +  ALK+ L
Sbjct: 669 WQARVELMRRHDTPGGQWPEVADTRLEAELEEWLIPFLSGIRRAEHFARIDLQSALKNLL 728

Query: 701 GWELSQQLDEWLPTHHLLPTGNHKKIRYQLGMEPTLSVRMQEVFGEQSSPRVAKGTRAVV 760
            WE +++LD   PTH ++P+G+   + Y     P L+V++QE+FG   SP VA G  +VV
Sbjct: 729 SWEQARRLDAEAPTHVVVPSGSRVPLDYTAEGGPVLAVKLQELFGMAESPVVAGGV-SVV 787

Query: 761 MELLSPAQRPLQVTRDLASFWAGAYKEVQKEMKGRYPKHVWPDDPANHVATSKTKRQ 817
           + LLSPA RPLQVTRDLA FW   Y  V+ EM+GRYPKH WP+DP   +AT  T+++
Sbjct: 788 VHLLSPAGRPLQVTRDLAGFWRTGYASVRAEMRGRYPKHPWPEDPLTAMATRHTRKR 844