Pairwise Alignments

Query, 820 a.a., ATP-dependent helicase HrpB from Vibrio cholerae E7946 ATCC 55056

Subject, 823 a.a., ATP-dependent helicase hrpB from Caulobacter crescentus NA1000

 Score =  592 bits (1525), Expect = e-173
 Identities = 343/817 (41%), Positives = 493/817 (60%), Gaps = 14/817 (1%)

Query: 4   LPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFHG-KIIMLEPRRLAAR 62
           LPI  V+P L + +  +   +L A PGAGK+T  PL LL A    G KII+LEPRRLAAR
Sbjct: 12  LPIENVLPALKAALLANNATVLVAPPGAGKTTAVPLALLDAPWVEGRKIIVLEPRRLAAR 71

Query: 63  NIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLIF 122
             A  +A  LGE VG  VG+RVR +++VS  T++E+VTEG+ TRM+ +DP LDGV  ++F
Sbjct: 72  AAAARMASNLGESVGDTVGFRVRLQSKVSARTRIEVVTEGVFTRMILDDPGLDGVAAVLF 131

Query: 123 DEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGRGFP 182
           DEFHERS+ AD  LA A +VQS LREDL++++MSATLD   + +LL  A  VESQGR FP
Sbjct: 132 DEFHERSLDADLGLAFARDVQSVLREDLRLLIMSATLDGARISSLLNDAPVVESQGRMFP 191

Query: 183 IEIRYQPLRSDEPLVTAMQRQIRHLLQHETGSLLAFLPGAASINQLTEQLSD--LASEVE 240
           ++ RY      + L   + R +   L  E+GS+L FLPG   I +    L++    S+V+
Sbjct: 192 VDTRYLGRDERQRLEERVGRAVERALAEESGSILVFLPGQGEIRRAESWLNERLRRSDVD 251

Query: 241 ICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDLK 300
           I PLYG +E AAQ RAI+P  AGRRKVVLAT+IAETSLTIEG+R+V+D+G  R  RFD  
Sbjct: 252 IAPLYGALEPAAQDRAISPAPAGRRKVVLATSIAETSLTIEGVRVVIDAGQARVPRFDPA 311

Query: 301 TGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLHTDLAPLA 360
           +GITRLE VR+++++A+QR GRAGR EPG+C RL+ E + +  P    PE+L  DL+ LA
Sbjct: 312 SGITRLETVRVSRAAADQRRGRAGRTEPGVCYRLWDEPETRSLPAFARPEILEADLSRLA 371

Query: 361 LELAQWGAQ-PSDLAWLNLPPSSAFAQAQQLLQRLGLLDARTQITAAGKEAHLLGVEPRI 419
           L+LA+WG + PSDL +L+ PP++AFA+A+ LL R+  LDA+  +TA GK    L + PR+
Sbjct: 372 LDLARWGTKDPSDLTFLDPPPAAAFAEARTLLMRVQALDAQGDLTAHGKALADLPLPPRL 431

Query: 420 AAMLLSADRLGESALQSALALTVLLEEPERQVIDVQHSLHRWQQGRHPKQKLLIQRAQSL 479
           A M+      G++   + +A  +  +    + +D++  L    + R P+ +     A +L
Sbjct: 432 AHMVARGAASGQAREAAEIAAVLTEQGLGGRDVDLRRRLEGLHRDRSPRGR----DAMAL 487

Query: 480 AHKLDTAFSLSS-VDSAWLPLVACLAFPDRIAQQRGQQTGQFLLANGHGAWLAVEDRLSA 538
             +   A   SS      + L+   A+P+R+A+ RG + G+F LA G G +L   D L+ 
Sbjct: 488 VERWSRAAGRSSGAKPLEIGLLLAEAYPERVAKARG-KPGEFQLAGGRGVYLEPTDPLAR 546

Query: 539 ADYLVALDLMRGQTQASQIFSALELDIHALERVLPALISRVEQVDWDEKAGRLSAEAQWR 598
             +L   +L  G ++   + +A   +    E     L++   +   +   G++ A+   R
Sbjct: 547 EAWLAVGELGGGDSRDRILLAAAVDEAQLRETFADRLVA---EDRLETTGGKVRAKRLLR 603

Query: 599 IDQLVLRREKLPEPDKQKMTQALLSYVRRKGLTVLQWSEDASEWLARARCAAEWLPEEAW 658
           + +LVL    +  PD   +  ALL  VR  GL+ L+  E     L R     + +  EAW
Sbjct: 604 LGKLVLEERLIENPDPAMIAGALLDQVRADGLSALRLGERGRALLDRVAFLRD-VDGEAW 662

Query: 659 PALDDETLLARLELWLEPYLAGVTSVKGLQSVSVLQALKHYLGWELSQQLDEWLPTHHLL 718
           P L +  L+ RL+ WLEP LAG +S+  L   ++  ALK  + W+L +++D  LP     
Sbjct: 663 PDLSESALIERLDEWLEPLLAGRSSLSSLDEGTLYDALKTLVPWDLQRKMDALLPARFEA 722

Query: 719 PTGNHKKIRYQLGMEPTLSVRMQEVFGEQSSPRVAKGTRAVVMELLSPAQRPLQVTRDLA 778
           PTGN   I Y     P + VR+ E++G    P VA G   + + LLSPA RP+Q+T+DL 
Sbjct: 723 PTGNSFAIDYSAEGGPRVEVRVGELYGLSEHPSVAGGKVPLTLSLLSPAHRPIQITKDLP 782

Query: 779 SFWAGAYKEVQKEMKGRYPKHVWPDDPANHVATSKTK 815
            FW G+++EV+ EMKGRYP+HVWPDDPA     ++ K
Sbjct: 783 GFWKGSWREVKVEMKGRYPRHVWPDDPAAAAPVTRAK 819