Pairwise Alignments

Query, 450 a.a., hydrolase from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  416 bits (1070), Expect = e-121
 Identities = 222/452 (49%), Positives = 295/452 (65%), Gaps = 17/452 (3%)

Query: 5   LKNIAMFKVVLLAVLALSIWSTRIPDMPYHQVTPELSRSDFHVIEFNDEGEMHLPGQYDM 64
           LK    +K++ L +L+L I    IPD  YH   PE ++ + HVIEFND+G+ H  GQ+  
Sbjct: 3   LKKFTQYKLLFLMLLSLGILLPFIPDQAYHMPGPETAKQNLHVIEFNDQGQPHNDGQWQG 62

Query: 65  LKARLAK-NPGA--ELLIFIHGWHHNAAPTDDNFVAFQRFHRQMAKTNP--GLIGLYIGW 119
           LKAR+ + N G   ELLIF+HGWHH+A P D+NFVAF++F++QMA ++    L+GLYIGW
Sbjct: 63  LKARILQPNNGTAPELLIFVHGWHHSANPKDENFVAFEQFYQQMAASDSQRNLLGLYIGW 122

Query: 120 RGDQYDPLWLDGSDDPESRVEALDFPTILTSKQVARRVGEHGVRKLLSSLDELHRQGTLG 179
           RGD+YDP WLDGSDD  S +E LDF TIL  K VA+R+G+ G+ +LL  LD L  +  L 
Sbjct: 123 RGDKYDPFWLDGSDDATSWIEPLDFSTILQRKTVAKRIGKTGLSQLLDKLDSLVAEQQLL 182

Query: 180 RYILVGHSLGGVVALHARKQAMLDNLAAGRGETHLTVLLNPAASAKEYQPLDKWLSPEGF 239
           RY ++GHSLGG+V LHA K  +   +   +   +L +LLNPAA  ++++PLD  +S +  
Sbjct: 183 RYTVIGHSLGGLVVLHASKDRIKAAIDNEQDNPNLFLLLNPAAPTQDFKPLDTLMSLDRQ 242

Query: 240 GPSMLVLQSKTDFAVREAFNWIKDGERAVGNSWAITHDVDPCSGRDCNKVVKIPQWLLEH 299
            PSM+VLQSK DFAV+EAFN+IKDGERA+GNSWAITHD+D CSG +C   +K+P  L+ H
Sbjct: 243 KPSMVVLQSKGDFAVKEAFNYIKDGERALGNSWAITHDIDKCSGGNCETPMKMPSALMAH 302

Query: 300 DAKPGCMQVLQGAGWKIRARLHARKTVQSCEDANRQAVWVLAVADGVIAGHNGILTDDQA 359
           D  PGCM  L  +GWKIRARL AR++VQ+C DAN QAVWVLAV+D +++GHNGILT D  
Sbjct: 303 DQLPGCMMTLPHSGWKIRARLQARRSVQTCADANMQAVWVLAVSDEIVSGHNGILTPDHG 362

Query: 360 LALNAWMKSKLTAATEVVPAEAVVEPSVIS-PHLSDEPVLPSMENIPTEVATEPL----- 413
            AL+  M   +      +P  AV  P+      L  EP   S  +       EP+     
Sbjct: 363 KALSEVM-GMIDLYRNQLPKHAVESPANEDLATLVPEPEAASTTDTQMSTPAEPVVIVEA 421

Query: 414 SSAVELEPQESESAVPAISEPTLEAPLVAQPE 445
           +S  E +PQ+ E+  P   EP      +AQPE
Sbjct: 422 ASEAENQPQQQEAPAPMKPEPA-----IAQPE 448