Pairwise Alignments

Query, 148 a.a., RNA polymerase-binding transcription factor DksA from Vibrio cholerae E7946 ATCC 55056

Subject, 147 a.a., TraR/DksA family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  248 bits (633), Expect = 3e-71
 Identities = 121/148 (81%), Positives = 135/148 (91%), Gaps = 1/148 (0%)

Query: 1   MTESKKKTLGILAIAGVEPYQEKPGEEYMSPGQITHFTKILEAWRNQLREEVDRTVHHMQ 60
           M E  KK LG+LAIAGV PYQE+PGEEYM+  Q+ HF KILEAWRNQLREEVDRT+ HMQ
Sbjct: 1   MPEGTKK-LGVLAIAGVAPYQEQPGEEYMNDQQLGHFKKILEAWRNQLREEVDRTLSHMQ 59

Query: 61  DEAANFPDPVDRASQEEEFSLELRNRDRERRLIKKIEKTLDKIKEEDFGYCESCGVEIGI 120
           DEAANFPDPVDRA+QEEEFSLELR RDRER+LIKKIEKTL +I+++DFG+C+SCGVEIGI
Sbjct: 60  DEAANFPDPVDRAAQEEEFSLELRARDRERKLIKKIEKTLQRIEDDDFGFCDSCGVEIGI 119

Query: 121 RRLEARPTADLCIDCKTLAEIKEKQMLG 148
           RRLEARPTADLCIDCKTLAEIKE+QM G
Sbjct: 120 RRLEARPTADLCIDCKTLAEIKERQMAG 147