Pairwise Alignments

Query, 148 a.a., RNA polymerase-binding transcription factor DksA from Vibrio cholerae E7946 ATCC 55056

Subject, 176 a.a., C4-type zinc finger protein, DksA/TraR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 49.7 bits (117), Expect = 2e-11
 Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 5/108 (4%)

Query: 38  TKILEAWRNQLREEVDRTVHHMQDEAAN-----FPDPVDRASQEEEFSLELRNRDRERRL 92
           T + +  R+ +R+ + R +  ++  A         D  + AS+  E +L +    R    
Sbjct: 53  TAMTDRQRSDIRDHLQRELDSLRRAAIMGGYEPCADENEFASRLAEMALSVTLLHRAEHR 112

Query: 93  IKKIEKTLDKIKEEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 140
           I  +E  L +++  D+G CE CG +I + RL+A P   LC+ C+  +E
Sbjct: 113 IGLLENALRRLEAYDYGVCEGCGEDIPVARLKASPATRLCVFCQQESE 160