Pairwise Alignments

Query, 148 a.a., RNA polymerase-binding transcription factor DksA from Vibrio cholerae E7946 ATCC 55056

Subject, 147 a.a., TraR/DksA family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  248 bits (632), Expect = 4e-71
 Identities = 122/148 (82%), Positives = 133/148 (89%), Gaps = 1/148 (0%)

Query: 1   MTESKKKTLGILAIAGVEPYQEKPGEEYMSPGQITHFTKILEAWRNQLREEVDRTVHHMQ 60
           M E  KK LG+LAIAGV PYQEKPGEEYM+  Q+ HF  ILEAWRNQLREEVDRT+ HMQ
Sbjct: 1   MPEGTKK-LGVLAIAGVSPYQEKPGEEYMNAKQLGHFKIILEAWRNQLREEVDRTLSHMQ 59

Query: 61  DEAANFPDPVDRASQEEEFSLELRNRDRERRLIKKIEKTLDKIKEEDFGYCESCGVEIGI 120
           DEAANFPDPVDRA+QEEEFSLELR RDRER+LIKKIEKTL KI+E+DFG+CE+CG+EIGI
Sbjct: 60  DEAANFPDPVDRAAQEEEFSLELRARDRERKLIKKIEKTLQKIEEDDFGFCETCGIEIGI 119

Query: 121 RRLEARPTADLCIDCKTLAEIKEKQMLG 148
           RRLEARPTAD CIDCKTLAEIKEKQM G
Sbjct: 120 RRLEARPTADQCIDCKTLAEIKEKQMAG 147