Pairwise Alignments

Query, 296 a.a., tRNA glutamyl-Q(34) synthetase GluQRS from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Glutamate--tRNA ligase from Synechococcus elongatus PCC 7942

 Score =  219 bits (558), Expect = 6e-62
 Identities = 121/286 (42%), Positives = 163/286 (56%), Gaps = 9/286 (3%)

Query: 5   GRFAPSPSGPLHFGSLIAALGSYFQAKAQQGTWLVRIEDLDPPREMPGAAAHILRTLEAY 64
           GRFAP+PSG LH GSL+AA+GSY   ++Q GTWL+RI+DLD PR +PGA+  I   LEA+
Sbjct: 7   GRFAPTPSGDLHLGSLVAAVGSYLHVRSQCGTWLLRIDDLDAPRVVPGASDRIQTCLEAF 66

Query: 65  RLHWDGTVVYQSQRHALYQDQIDAWLSTGQAYYCQCTRKAIKAMGGF--------YNGHC 116
            LHWD  V +Q  +   YQ  ++   +TG+ Y CQC+RK +   G          Y G C
Sbjct: 67  GLHWDEVVYFQQPQQEHYQAALEQLTATGRVYRCQCSRKQLSQSGDSVSVDGSLRYPGFC 126

Query: 117 KIHPPARQQDCSIRLRMDN-QVQQFIDLKHGTITIPKALAEEDFIIKRRDGLFAYNLAVV 175
           +    + + + S RL + N       D   G      A A  DFI++RRD LF+Y+LA V
Sbjct: 127 RDRQLSSEIEGSDRLNVQNLPAIALEDAWQGRYQQDLAQAVGDFILRRRDRLFSYHLATV 186

Query: 176 LDDIDQGVTQVVRGADLIEPTGRQISLYHTLKQKPVSYLHLPLAMDGNGNKLSKQNHAPA 235
           +DD  QG+T+V+RG DL+  T RQI+L   L      Y HLPL +  NG+KLSKQ  AP 
Sbjct: 187 VDDARQGITEVIRGLDLLASTPRQIALQQLLNLPTPHYGHLPLVVWPNGDKLSKQTKAPP 246

Query: 236 IDPTAPRQTISHAMQFLGFTLPTDFSDASAEQMLAWGCQHWQVSQL 281
           +D       +S A+  LG  LP+D   A   + LAW   H+   +L
Sbjct: 247 LDLRQAPALLSQAIGHLGLALPSDLQGAPVGEQLAWAIAHFPAPRL 292