Pairwise Alignments

Query, 296 a.a., tRNA glutamyl-Q(34) synthetase GluQRS from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., glutamyl-tRNA synthetase domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  280 bits (716), Expect = 3e-80
 Identities = 151/286 (52%), Positives = 193/286 (67%), Gaps = 6/286 (2%)

Query: 3   YIGRFAPSPSGPLHFGSLIAALGSYFQAKAQQGTWLVRIEDLDPPREMPGAAAHILRTLE 62
           Y+GRFAPSPSG LHFGSL+AALGSY +A++  G WL+RIED+DPPRE+ GAA  ILRTLE
Sbjct: 15  YVGRFAPSPSGALHFGSLVAALGSYLRARSLGGKWLIRIEDIDPPREVKGAADDILRTLE 74

Query: 63  AYRLHWDGTVVYQSQRHALYQDQIDAWLSTGQAYYCQCTRKAIKAMGGFYNGHC-KIHPP 121
           AY   WD TV+YQS R   YQ ++D  L+   AY+CQC+RK I+AMGG Y+G C ++  P
Sbjct: 75  AYGFEWDDTVLYQSARTDAYQAKLDQLLAQDDAYFCQCSRKQIQAMGGIYDGRCHQLATP 134

Query: 122 ARQQDCSIRLRMDNQVQQFIDLKHGTITIPKALAEEDFIIKRRDGLFAYNLAVVLDDIDQ 181
              Q  +IRL    QV +F D   G + +    A EDFIIKR DGL+AY LAVVLDD  Q
Sbjct: 135 --HQSGAIRLVNRAQVAEFTDNLMGKVVVDHDFATEDFIIKRSDGLYAYQLAVVLDDAHQ 192

Query: 182 GVTQVVRGADLIEPTGRQISLYHTLKQKPVSYLHLPLAMDGNGNKLSKQNHAPAIDPTAP 241
           G+++VVRG DLIE + RQ+SLY +L      +LHLPLA    G KLSKQNHA AID   P
Sbjct: 193 GISEVVRGCDLIEASCRQLSLYQSLGLTAPQWLHLPLACLTPGFKLSKQNHAQAIDKQHP 252

Query: 242 RQTISHAMQFLGFTLPTDFSDASAEQMLAWGCQHWQVSQLPEAIEI 287
           + +++ A+ FLG    +     SA QMLA     ++++ +P+  EI
Sbjct: 253 QASLNAALTFLG---QSTVEPTSAAQMLAQAVAQFELTAVPKQREI 295