Pairwise Alignments

Query, 457 a.a., polynucleotide adenylyltransferase PcnB from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., poly(A) polymerase from Pseudomonas stutzeri RCH2

 Score =  392 bits (1008), Expect = e-113
 Identities = 207/444 (46%), Positives = 295/444 (66%), Gaps = 11/444 (2%)

Query: 14  YPDLALTIIPRQEHPISRQQISENALKVLYRLHGAGFEAFLVGGGVRDLLLGGKPKDFDV 73
           +P     I+  ++H + R +IS  A+ V+ RL  AG+EA++VGG VRDLLL   PKD+DV
Sbjct: 18  HPRRTPEILSSRQHSLHRNEISRYAVSVVERLQQAGYEAYVVGGCVRDLLLQLNPKDYDV 77

Query: 74  ATNATPEQLRQLFRNCRLIGRRFRLAHIMFGRDIVEVATFRGHHQESSQ--SQNIAAQSE 131
           AT+ATPEQ+R  FRN R+IGRRF+L H+ FGR+I+EVATFR +H E     + ++A+++E
Sbjct: 78  ATSATPEQVRAEFRNARVIGRRFKLVHVHFGREIIEVATFRANHPEEDDDDASHLASRNE 137

Query: 132 AGMLLRDNVYGTIDEDAERRDFTINAMYYNIADYSIHDYAGGMEDLEDRLVRLIGDPETR 191
           +G +LRDN+YGT+++DA+RRDFTINA+YY+     I D+  G+ D+ +RL+RLIGDPE R
Sbjct: 138 SGRILRDNIYGTLEDDAQRRDFTINALYYDPTTERILDHTRGVHDIRNRLIRLIGDPEQR 197

Query: 192 YREDPVRMLRAVRFAVKLDFDIEEDTAAPIEQLAPLLRDIPAARLYEESLKMLQAGHGLE 251
           Y+EDPVRMLRAVRFA KLDF+IE  +A PI +LA LL  IP+ARL++E LK+   G    
Sbjct: 198 YQEDPVRMLRAVRFAAKLDFEIERHSAEPIVELADLLDGIPSARLFDEVLKLFLGGKAER 257

Query: 252 TYHLMRQYNLFQQLFPTIAEHFTADHSSKTEQMLDLVLDATDIRVEEDLRINPAFMFAAM 311
           T+ L+ +Y+LF  LFP  A     D       ++   L  TD+R+++   + PAF+FAA+
Sbjct: 258 TFELLLEYDLFAPLFPASAAALERD-PEYAGTLIRNALANTDLRIQQGKPVTPAFLFAAL 316

Query: 312 LWYPMIDLADRLMESLDLNEFDAITEASNRILDEVVKRIAIPRRHTTTVRDIWQLQQRLP 371
           LW P +      +++  +    A+ EA++ I+ E  +R AIP+R T  +R+IW +Q+RLP
Sbjct: 317 LW-PALPARVLELQNRGMPPIPAMQEAAHDIIWEQCQRTAIPKRFTMPMREIWDMQERLP 375

Query: 372 RRSGKRAFRLLELNKFRAGFDFLEMRGEIEGGETKQLAEWWATFQSAGRNMRQAMV---- 427
           RR G+RA +LLE  +FRAG+DFL +R E  G +T  L +WW  +Q A  + R+ M+    
Sbjct: 376 RRQGRRADQLLENPRFRAGYDFLLLR-ESAGEQTGGLGDWWTDYQEASESERRNMIRGLS 434

Query: 428 --GDIGNATGSSKSGARRRKPSRN 449
              D G A    + G RRR P  N
Sbjct: 435 NKDDAGAAKKRRRGGRRRRAPGDN 458