Pairwise Alignments

Query, 457 a.a., polynucleotide adenylyltransferase PcnB from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., tRNA nucleotidyltransferase (CCA-adding enzyme) (RefSeq) from Shewanella amazonensis SB2B

 Score =  461 bits (1187), Expect = e-134
 Identities = 234/415 (56%), Positives = 297/415 (71%), Gaps = 7/415 (1%)

Query: 41  VLYRLHGAGFEAFLVGGGVRDLLLGGKPKDFDVATNATPEQLRQLFRNCRLIGRRFRLAH 100
           +LYRL+ AG+EAFLVGGGVRDLLLG +PKDFDV TNATPE +++LFRNCRL+GRRFRLAH
Sbjct: 1   MLYRLNKAGYEAFLVGGGVRDLLLGLEPKDFDVVTNATPEDIKKLFRNCRLVGRRFRLAH 60

Query: 101 IMFGRDIVEVATFRGHHQESSQSQNIAAQSEAGMLLRDNVYGTIDEDAERRDFTINAMYY 160
           I+FGRD++EVATFRGHH      +   A +E G LLRDNVYG+IDEDAERRDFT+NA+YY
Sbjct: 61  IVFGRDVIEVATFRGHHGNEDGDKISKANAE-GRLLRDNVYGSIDEDAERRDFTVNALYY 119

Query: 161 NIADYSIHDYAGGMEDLEDRLVRLIGDPETRYREDPVRMLRAVRFAVKLDFDIEEDTAAP 220
           +I+DYSI  Y GGMEDL D ++RLIGDPETRYREDPVRM+RAVRFA KL   IEE TAAP
Sbjct: 120 DISDYSIRSYGGGMEDLNDGVLRLIGDPETRYREDPVRMIRAVRFATKLGMRIEEVTAAP 179

Query: 221 IEQLAPLLRDIPAARLYEESLKMLQAGHGLETYHLMRQYNLFQQLFPTIAEHFTADHSSK 280
           I +LAPLLRDIPAAR+YEE LK+  AG G   Y +M++Y LF  +FP +A+         
Sbjct: 180 IRKLAPLLRDIPAARMYEEVLKLFFAGKGQANYQMMQEYQLFAPIFPLLADTIADSPKGH 239

Query: 281 TEQMLDLVLDATDIRVEEDLRINPAFMFAAMLWYPMIDLADRLMESLDLNEFDAITEASN 340
             +M++LV+  TDIRV ED  + PAF +AA+LWYP+   A+ +     L+ +DA   A  
Sbjct: 240 CARMVNLVMRNTDIRVMEDKPVTPAFFYAALLWYPLKSRAEEIANESGLSLYDAYFAAMG 299

Query: 341 RILDEVVKRIAIPRRHTTTVRDIWQLQQRLPRRSGKRAFRLLELNKFRAGFDFLEMRGEI 400
            +L++  + I++P+R +   RDIWQ+Q R  R  G RAF+L+E  KFRAG+D L MR EI
Sbjct: 300 DVLEQQCQTISLPKRFSVPARDIWQMQLRFERSQGTRAFKLMESPKFRAGYDLLLMRAEI 359

Query: 401 EGGETKQLAEWWATFQSAGRNMRQAMVGDIGNATGSSKSGARRRKPSRNKSKSKS 455
           EGG  ++ A WW +F  A    R    G+I  A G +KS A R +  R + + +S
Sbjct: 360 EGGNLQKTASWWQSFVEAPEEER----GNI--ARGGAKSDAPRNRKRRVRRRPRS 408