Pairwise Alignments

Query, 457 a.a., polynucleotide adenylyltransferase PcnB from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., poly(A) polymerase (RefSeq) from Shewanella loihica PV-4

 Score =  478 bits (1231), Expect = e-139
 Identities = 236/441 (53%), Positives = 311/441 (70%), Gaps = 4/441 (0%)

Query: 9   SNTRTYP-DLALTIIPRQEHPISRQQISENALKVLYRLHGAGFEAFLVGGGVRDLLLGGK 67
           + T T P  L+L I+ R+ H ISRQ ISENA+KVLYRLH +GF+A+LVGGGVRD+LLG +
Sbjct: 38  NTTETTPAGLSLEIVARKHHAISRQHISENAIKVLYRLHKSGFKAYLVGGGVRDILLGLE 97

Query: 68  PKDFDVATNATPEQLRQLFRNCRLIGRRFRLAHIMFGRDIVEVATFRGHHQESSQSQNIA 127
           PKDFDV TNATPE++++LFRNCRL+GRRFRLAHI+FGRD++EVAT RGHH +S +   I+
Sbjct: 98  PKDFDVVTNATPEEIKKLFRNCRLVGRRFRLAHIVFGRDVIEVATLRGHHVDSGEK--IS 155

Query: 128 AQSEAGMLLRDNVYGTIDEDAERRDFTINAMYYNIADYSIHDYAGGMEDLEDRLVRLIGD 187
             +  G LLRDNVYGTIDEDAERRDFT+NA+YY+I+D+SIH Y GG++DLE R +RLIGD
Sbjct: 156 KVNAEGRLLRDNVYGTIDEDAERRDFTVNALYYDISDFSIHSYGGGLQDLESRTLRLIGD 215

Query: 188 PETRYREDPVRMLRAVRFAVKLDFDIEEDTAAPIEQLAPLLRDIPAARLYEESLKMLQAG 247
           P+ RYREDPVRMLRAVRFA KL   I++  A PI +LAPLL+DIPAAR+YEE LK+  AG
Sbjct: 216 PQKRYREDPVRMLRAVRFATKLGMSIDKAAAQPISELAPLLKDIPAARMYEEVLKLFFAG 275

Query: 248 HGLETYHLMRQYNLFQQLFPTIAEHFTADHSSKTEQMLDLVLDATDIRVEEDLRINPAFM 307
                Y +MR + LF  LFP +      D    + +M+  ++  TD RVE+D  + PAF 
Sbjct: 276 QAQNNYVMMRDFGLFAPLFPLVDNLLEEDPKGPSHKMVKAIMRNTDERVEQDKSVTPAFF 335

Query: 308 FAAMLWYPMIDLADRLMESLDLNEFDAITEASNRILDEVVKRIAIPRRHTTTVRDIWQLQ 367
           +AAMLWYP+   AD +     L+++DA   A   ++++  + I+IPRR +T  +DIWQLQ
Sbjct: 336 YAAMLWYPLSQRADDIALESGLSQYDAFYAAMGDVMEQQCRTISIPRRFSTPAKDIWQLQ 395

Query: 368 QRLPRRSGKRAFRLLELNKFRAGFDFLEMRGEIEGGETKQLAEWWATFQSAGRNMRQAMV 427
            R  R  G RAF+ +E  KFRA +D L +R E EGG   + A WW +F   G   +++++
Sbjct: 396 LRFERNQGTRAFKFIEHPKFRAAYDLLLLRAEAEGGNLAKTAAWWKSFVE-GSEEQRSVI 454

Query: 428 GDIGNATGSSKSGARRRKPSR 448
               N    S++  RRR P +
Sbjct: 455 ARSTNKGSRSRNNRRRRSPKK 475