Pairwise Alignments

Query, 457 a.a., polynucleotide adenylyltransferase PcnB from Vibrio cholerae E7946 ATCC 55056

Subject, 158 a.a., hypothetical tRNA nucleotidyl transferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 61.2 bits (147), Expect = 2e-14
 Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 20/171 (11%)

Query: 53  FLVGGGVRDLLLGGKPKDFD-VATNATPEQLRQLFRNCRLIGRRFRLAHIMFGRDIVEVA 111
           +LVGG VRD LL    KD D +   ATPEQ++QL    R +G+ F +   +  +   E A
Sbjct: 4   YLVGGAVRDSLLNLPIKDKDYMVVGATPEQMQQL--GYRQVGKDFPV--FLHPKTQQEYA 59

Query: 112 TFRGHHQESSQSQNIAAQSEAGMLLRDNVYGTIDEDAERRDFTINAMYYNIADYSIHDYA 171
             R   +        +  +   +        T+++D  RRD TINA+  +  + +++D  
Sbjct: 60  LARTERKVGLGYGGFSCYASPDV--------TLEQDLLRRDLTINAIAKD-EEGNLYDPY 110

Query: 172 GGMEDLEDRLVRLIGDPETRYREDPVRMLRAVRFAVK---LDFDIEEDTAA 219
            G+ D++ R +R +      + EDP+R+LR  RFA +   L F+I  +T A
Sbjct: 111 QGIADIKARQLRHVS---AAFSEDPLRVLRVARFAARFHSLGFEIANETLA 158