Pairwise Alignments

Query, 457 a.a., polynucleotide adenylyltransferase PcnB from Vibrio cholerae E7946 ATCC 55056

Subject, 435 a.a., poly(A) polymerase (RefSeq) from Shewanella sp. ANA-3

 Score =  477 bits (1228), Expect = e-139
 Identities = 239/435 (54%), Positives = 308/435 (70%), Gaps = 5/435 (1%)

Query: 22  IPRQEHPISRQQISENALKVLYRLHGAGFEAFLVGGGVRDLLLGGKPKDFDVATNATPEQ 81
           +PR  H ISR+QISENALKVLYRL+ +GF+A+LVGGGVRDLLLG +PKDFDV TNATPE+
Sbjct: 1   MPRDAHSISRKQISENALKVLYRLNKSGFQAYLVGGGVRDLLLGLEPKDFDVVTNATPEE 60

Query: 82  LRQLFRNCRLIGRRFRLAHIMFGRDIVEVATFRGHHQESSQSQNIAAQSEAGMLLRDNVY 141
           +++LFRNCR++GRRFRLAHI+FGRD++EVATFRGHH +S++   I+  +  G LLRDNVY
Sbjct: 61  IKKLFRNCRVVGRRFRLAHIVFGRDVIEVATFRGHHGDSNEK--ISKANAEGRLLRDNVY 118

Query: 142 GTIDEDAERRDFTINAMYYNIADYSIHDYAGGMEDLEDRLVRLIGDPETRYREDPVRMLR 201
           G IDEDAERRDFT+NA+YY+I+DYSI  Y GGMEDL+   +RLIGDPETRYREDPVRMLR
Sbjct: 119 GEIDEDAERRDFTVNALYYDISDYSIRSYGGGMEDLKAGTLRLIGDPETRYREDPVRMLR 178

Query: 202 AVRFAVKLDFDIEEDTAAPIEQLAPLLRDIPAARLYEESLKMLQAGHGLETYHLMRQYNL 261
           AVRFA KL   IEE TA PI+QLAPLL+DIPAAR+YEE LK+  AG  +  + +M++Y L
Sbjct: 179 AVRFATKLSMAIEEVTAKPIKQLAPLLKDIPAARMYEEVLKLFFAGKAMANFEMMQEYKL 238

Query: 262 FQQLFPTIAEHFTADHSSKTEQMLDLVLDATDIRVEEDLRINPAFMFAAMLWYPMIDLAD 321
           F  LFP +             +M+  ++ +TD RV ED  + P+F +AA+LWYP+   A+
Sbjct: 239 FAPLFPQVDAQLKDAPKGPAMKMVQAIMKSTDARVNEDKPVTPSFFYAAILWYPLRQRAE 298

Query: 322 RLMESLDLNEFDAITEASNRILDEVVKRIAIPRRHTTTVRDIWQLQQRLPRRSGKRAFRL 381
            +     L  +DA   A   ++++  + I+IPRR +T  +DIWQLQ R  R  G RAF+L
Sbjct: 299 DIAVESGLTLYDAFFAAMGDVIEQQCQTISIPRRFSTPAKDIWQLQLRFDRSQGTRAFKL 358

Query: 382 LELNKFRAGFDFLEMRGEIEGGETKQLAEWWATFQSAGRNMRQAMVGDIGNATGSSKSGA 441
           LE  KFRA +D L +RGE+EGG   + A WW  F  A    R  +      A G+    +
Sbjct: 359 LEHPKFRAAYDLLLLRGEVEGGNVAKSAAWWQQFVEADETERLNIARSGNKAAGNRNRNS 418

Query: 442 ---RRRKPSRNKSKS 453
              RRR+PS  K+K+
Sbjct: 419 PQRRRRRPSAAKAKA 433