Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., ABC-type multidrug transport system, permease component from Pseudomonas fluorescens FW300-N2E2

 Score =  324 bits (831), Expect = 1e-93
 Identities = 157/249 (63%), Positives = 194/249 (77%)

Query: 8   AFCSLLGKEINRFTRIWVQTLVPPAITMTLYFIIFGNLIGSRIGQMNGFSYMEYIVPGLI 67
           A  +++ +E+ RF RIW QTL+PPAITM LYF+IFGNLIG +IG M GF+YM+YIVPGLI
Sbjct: 13  ALNTIVYREVRRFMRIWPQTLLPPAITMVLYFVIFGNLIGRQIGDMGGFTYMDYIVPGLI 72

Query: 68  MMSVITNSYSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGLLVGAMVTAV 127
           MMSVITNSY NV SSFF SKFQ++IEEL+V+PV  + I+ GY +GGV RGL VG +VT +
Sbjct: 73  MMSVITNSYGNVVSSFFGSKFQRSIEELMVSPVSPHTILIGYTLGGVLRGLAVGLIVTLL 132

Query: 128 SLLFVDLQVDHWGIIIATVFLTSVVFSLGGLINAVFAKTFDDISIVPTFVLTPLTYLGGV 187
           SL F DLQV H G+ +  V LT+ +FSL G INAVFA+ FDDISI+PTFVLTPLTYLGGV
Sbjct: 133 SLFFTDLQVHHLGVTVLVVVLTATIFSLLGFINAVFARNFDDISIIPTFVLTPLTYLGGV 192

Query: 188 FYSISLLPEFWQSVSKINPIVYMVNAFRYGFLGVSDVDIMTSFAVLMAFVVALYCVAHYL 247
           FYSISLLP FWQ+VS  NP+++MVNAFRYG LGVSD+ I  +   ++   V LY     L
Sbjct: 193 FYSISLLPPFWQTVSLANPVLHMVNAFRYGILGVSDIKISIAITFMLVATVVLYIGCARL 252

Query: 248 VTKGKGLRS 256
           +  G+G+R+
Sbjct: 253 LVSGRGMRT 261