Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., ABC-type polysaccharide/polyol phosphate export systems, permease component from Pseudomonas stutzeri RCH2

 Score =  327 bits (838), Expect = 2e-94
 Identities = 156/248 (62%), Positives = 202/248 (81%)

Query: 8   AFCSLLGKEINRFTRIWVQTLVPPAITMTLYFIIFGNLIGSRIGQMNGFSYMEYIVPGLI 67
           A  +++ +EI R+TRIW QTL+PPAITM LYF+IFG+LIG+RIG M+GFSYM+YIVPGLI
Sbjct: 11  ALQTIVQREIRRYTRIWPQTLLPPAITMVLYFVIFGSLIGARIGDMDGFSYMDYIVPGLI 70

Query: 68  MMSVITNSYSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGLLVGAMVTAV 127
           MMSVITNSYSNV SSFFS+KFQ++IEELLV+PV  +VI+ G+ +GG+ RGL V  +VT +
Sbjct: 71  MMSVITNSYSNVVSSFFSTKFQRSIEELLVSPVSPHVIVIGFALGGITRGLAVAVIVTLL 130

Query: 128 SLLFVDLQVDHWGIIIATVFLTSVVFSLGGLINAVFAKTFDDISIVPTFVLTPLTYLGGV 187
           S+ F DLQV H G+ +  + LT+ +F+LGG INAVFA+ FDDISI+PTFVLTPLTYLGGV
Sbjct: 131 SMFFTDLQVHHLGVTVLVITLTASIFALGGFINAVFARNFDDISIIPTFVLTPLTYLGGV 190

Query: 188 FYSISLLPEFWQSVSKINPIVYMVNAFRYGFLGVSDVDIMTSFAVLMAFVVALYCVAHYL 247
           FYSI+LL  FWQ++S  NP+++MVNAFRYG LGVSD+ I  + + ++  V ALY V+  L
Sbjct: 191 FYSINLLSPFWQTLSLANPVLHMVNAFRYGILGVSDIRIGVAISFMLVAVAALYLVSVGL 250

Query: 248 VTKGKGLR 255
           +  G+G+R
Sbjct: 251 LKSGRGMR 258