Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., NodJ ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 71.2 bits (173), Expect = 2e-17
 Identities = 46/218 (21%), Positives = 102/218 (46%), Gaps = 7/218 (3%)

Query: 37  LYFIIFGNLIGSRIGQMNGFSYMEYIVPGLIMMSVIT-NSYSNVASSFFSSKFQKNIEEL 95
           +Y    G  +G  +G+++G SY+ ++  G++  S +T +++  + ++F   + Q+  E +
Sbjct: 44  IYLFGLGAGLGMMVGRVDGVSYIAFLSAGMVATSAMTASTFETIYATFARMRAQRTWEAI 103

Query: 96  LVAPVPNYVIIAGYVMGGVARGLLVGAMVTAVSLLFVDLQVDHWGII---IATVFLTSVV 152
           L   V    I+ G +     +  L G   T + ++   L    W  +   +  + LT + 
Sbjct: 104 LHTQVTIGDIVLGELAWAATKASLAG---TGIGVVAATLGYTEWVSLLYALPVIALTGLA 160

Query: 153 FSLGGLINAVFAKTFDDISIVPTFVLTPLTYLGGVFYSISLLPEFWQSVSKINPIVYMVN 212
           F+   +I    A +++      T V+TP+ +L G  + ++ LP  +Q V++I P+ + ++
Sbjct: 161 FASLAMIVTALAPSYEYFIFYQTLVITPMLFLSGAVFPVNQLPGAFQHVTRILPLAHSID 220

Query: 213 AFRYGFLGVSDVDIMTSFAVLMAFVVALYCVAHYLVTK 250
             R   LG   V +      L  + V  + ++  L+ +
Sbjct: 221 VIRPIMLGSPLVHVGLHIGALCCYAVVPFFLSTALLRR 258