Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., ABC-type polysaccharide/polyol phosphate export systems permease component (RefSeq) from Shewanella amazonensis SB2B

 Score =  384 bits (987), Expect = e-112
 Identities = 186/256 (72%), Positives = 224/256 (87%)

Query: 1   MYQIYWTAFCSLLGKEINRFTRIWVQTLVPPAITMTLYFIIFGNLIGSRIGQMNGFSYME 60
           M  +Y TAF S+L KEI RFTRIWVQTLVPPAITMTLYF+IFGNL+G RIGQM G SYME
Sbjct: 1   MKALYLTAFKSILIKEITRFTRIWVQTLVPPAITMTLYFMIFGNLVGGRIGQMGGVSYME 60

Query: 61  YIVPGLIMMSVITNSYSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGLLV 120
           +I PGLIMMSVITNSYSNVASSFFS+KFQ+N+EEL+VAPVP+YV+IAGYV GGVARGL V
Sbjct: 61  FIAPGLIMMSVITNSYSNVASSFFSAKFQRNLEELIVAPVPHYVMIAGYVGGGVARGLCV 120

Query: 121 GAMVTAVSLLFVDLQVDHWGIIIATVFLTSVVFSLGGLINAVFAKTFDDISIVPTFVLTP 180
           G +VT V+L FVDL + H G++  TVF+TSV+FSLGGLINAVFAK+FDDISI+PTFVLTP
Sbjct: 121 GLIVTLVALSFVDLSIHHLGLVAVTVFITSVLFSLGGLINAVFAKSFDDISIIPTFVLTP 180

Query: 181 LTYLGGVFYSISLLPEFWQSVSKINPIVYMVNAFRYGFLGVSDVDIMTSFAVLMAFVVAL 240
           LTYLGGVFYS+SLLP+FW +VS +NP+VYM+N FRYGFLGV+D+ +  SFAV+++    L
Sbjct: 181 LTYLGGVFYSLSLLPDFWHAVSTLNPVVYMINLFRYGFLGVADLSLGVSFAVMLSLCAGL 240

Query: 241 YCVAHYLVTKGKGLRS 256
           + +A+YL+++G GLRS
Sbjct: 241 WYLAYYLISRGIGLRS 256