Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 276 a.a., ABC-2 transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 11/211 (5%)

Query: 37  LYFIIFGNLIGS--RIGQMNGFSYMEYIVPGLIMMSVITNS-YSNVASSFFSSKFQKNIE 93
           L++++ G+ +    R   M   SY EY  PG+++M V+  S +S +  +    + Q  ++
Sbjct: 47  LFWLVLGSGLSPSFRPTGMAAMSYTEYFYPGMLLMMVLFASVFSTI--TVIEDRDQGFLQ 104

Query: 94  ELLVAPVPNYVIIAGYVMGGVARGLLVG-AMVTAVSLLFVDLQVDHWGIIIATVFLTSVV 152
            +LVAPV    I+ G V G  A  L     ++ A  +L        + +I+ T+ L S+ 
Sbjct: 105 GVLVAPVSRLAIVLGKVGGAAAIALFQSIVLLCAAPVLGFSTGPLGYLLILVTLTLLSLG 164

Query: 153 FSLGGLINAVFAKTFDDISIVPTFVLTPLTYLGGVFYSISLLPEFWQSVSKINPIVYMVN 212
           F+  G + A    +      V   VL PL +L G  + +  +P   + +  INP+ + + 
Sbjct: 165 FTGLGFLTAWGMASTSGFHAVMMLVLMPLWFLSGALFPVQGVPAVLEGLMMINPVTHGMT 224

Query: 213 AFRYGFLG-----VSDVDIMTSFAVLMAFVV 238
             R  F       +SD   + S AV+  +VV
Sbjct: 225 ILRAPFYEAPGALLSDGSYLGSLAVVALWVV 255