Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., ABC-2 transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  171 bits (433), Expect = 1e-47
 Identities = 86/253 (33%), Positives = 144/253 (56%), Gaps = 1/253 (0%)

Query: 4   IYWTAFCSLLGKEINRFTRIWVQTLVPPAITMTLYFIIFGNLIGSRIGQMNGFSYMEYIV 63
           + W     L  KE+ RF ++++QTL  P +T  ++  IF   +G +  Q  G  +ME++ 
Sbjct: 19  VNWLGLWELYLKEVRRFLKVYLQTLAAPLVTTLIFLAIFALSVGPQTAQ-GGLGFMEFLA 77

Query: 64  PGLIMMSVITNSYSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGLLVGAM 123
           PGLIMM+++ N+++N +SS   +K Q NI ++L+ P+    +   Y +GGV RG++VG  
Sbjct: 78  PGLIMMAMVQNAFANTSSSLIIAKVQGNIVDVLMPPLNATELTLAYALGGVTRGVMVGIF 137

Query: 124 VTAVSLLFVDLQVDHWGIIIATVFLTSVVFSLGGLINAVFAKTFDDISIVPTFVLTPLTY 183
           V    + FV L +     I+   F  S++ SL G+I  ++A  FD ++ V  F++TPL++
Sbjct: 138 VALGMMAFVTLHIHSVFFIVYHAFAASLMLSLLGMIAGIWADKFDHMASVTNFIVTPLSF 197

Query: 184 LGGVFYSISLLPEFWQSVSKINPIVYMVNAFRYGFLGVSDVDIMTSFAVLMAFVVALYCV 243
           L G FY+I  LPE  + ++ +NP  YM++ FR+GF+G      +T   V+  F V L  V
Sbjct: 198 LSGTFYTIDRLPESLRFLAHLNPFFYMIDGFRFGFIGHDQAMPITGLVVVGGFNVVLAAV 257

Query: 244 AHYLVTKGKGLRS 256
              +   G  L++
Sbjct: 258 CWQMFRTGYKLKA 270