Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., inner membrane transport permease from Phaeobacter inhibens DSM 17395

 Score =  199 bits (505), Expect = 6e-56
 Identities = 100/251 (39%), Positives = 149/251 (59%)

Query: 6   WTAFCSLLGKEINRFTRIWVQTLVPPAITMTLYFIIFGNLIGSRIGQMNGFSYMEYIVPG 65
           WTA  S+   E+ RF R  +Q+ + P ++ +LYF++FG  IGSRI ++ G  Y  +IVPG
Sbjct: 3   WTAIASIYRFEMARFFRTLMQSFLSPVLSTSLYFVVFGAAIGSRIDEVEGVPYGAFIVPG 62

Query: 66  LIMMSVITNSYSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGLLVGAMVT 125
           LIM+SV+T + SN +   +  KF   I ELL APV    I+ GYV     + L +G ++ 
Sbjct: 63  LIMLSVMTQATSNASFGIYFPKFIGTIYELLSAPVNFLEIVIGYVGAAATKALFIGVVIL 122

Query: 126 AVSLLFVDLQVDHWGIIIATVFLTSVVFSLGGLINAVFAKTFDDISIVPTFVLTPLTYLG 185
             + LFVDL + H   ++  + LT V F+L G I  V+AK F+ + +VP  ++TPL +LG
Sbjct: 123 VTASLFVDLTIAHPLAMVLFMVLTCVSFALLGFIIGVWAKNFEQLQLVPLLIVTPLVFLG 182

Query: 186 GVFYSISLLPEFWQSVSKINPIVYMVNAFRYGFLGVSDVDIMTSFAVLMAFVVALYCVAH 245
           G FYSIS+LP  WQ ++  NP+VY+++ FR+ F G SDV +  S   +  F      V  
Sbjct: 183 GSFYSISMLPPIWQKITLFNPVVYLISGFRWSFFGASDVPVGLSLLAIGGFTALCLAVIW 242

Query: 246 YLVTKGKGLRS 256
           ++   G  +RS
Sbjct: 243 WIFKTGWRIRS 253