Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., inner membrane transport permease from Phaeobacter inhibens DSM 17395

 Score =  167 bits (423), Expect = 2e-46
 Identities = 86/253 (33%), Positives = 146/253 (57%), Gaps = 4/253 (1%)

Query: 6   WTAFCSLLGKEINRFTRIWVQTLVPPAITMTLYFIIFGNLIGSRIGQMNGFSYMEYIVPG 65
           W    +L  +EI RF  +W QTL+ P +T  L+ +IF   IG   G + G  ++E++ PG
Sbjct: 28  WLGLRTLARREITRFLVVWTQTLMAPMVTAALFLMIFNIAIGPGRGDVMGVPFIEFLAPG 87

Query: 66  LIMMSVITNSYSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGLLVGAMVT 125
           ++MM+VI N+++N +SS   +K Q NI + L+ P+  + I+ GY+ G VARG+LV   + 
Sbjct: 88  IMMMTVIQNAFANTSSSIVITKVQGNIVDTLMPPLSGFEILLGYLAGAVARGVLVALGIG 147

Query: 126 AVSLLFVDLQVDHWGIIIATVFLTSVVFSLGGL--INAVFAKTFDDISIVPTFVLTPLTY 183
              +L + +  +H   ++A +F+      LGGL  +  VFA+ FD ++ +  F++TPL +
Sbjct: 148 TGLMLVLGVVPEH--PLVALLFVVLGALFLGGLGIVAGVFAEKFDQMAAITNFIVTPLAF 205

Query: 184 LGGVFYSISLLPEFWQSVSKINPIVYMVNAFRYGFLGVSDVDIMTSFAVLMAFVVALYCV 243
           L G FYS+  LP   + +S +NP+ Y+++  R+G +G SD   +    V     VA+  +
Sbjct: 206 LSGTFYSVEALPPVLRLLSHLNPVFYLIDGVRFGVIGTSDSSPLLGLLVCSLSSVAIGTL 265

Query: 244 AHYLVTKGKGLRS 256
           A  ++  G  L+S
Sbjct: 266 AWLMLRSGYRLKS 278