Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., ABC-2 type transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  386 bits (991), Expect = e-112
 Identities = 184/256 (71%), Positives = 223/256 (87%)

Query: 1   MYQIYWTAFCSLLGKEINRFTRIWVQTLVPPAITMTLYFIIFGNLIGSRIGQMNGFSYME 60
           M Q+Y+ AF S+L KEINRFTRIW+QTLVPPAITMTLYF+IFGNL+GSRIG M G SYME
Sbjct: 1   MKQLYFIAFKSILTKEINRFTRIWIQTLVPPAITMTLYFLIFGNLVGSRIGDMGGVSYME 60

Query: 61  YIVPGLIMMSVITNSYSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGLLV 120
           +I PGLIMMSVITNSYSNVASSF+S+KFQ+N+EEL+VAPVP+YV+IAGYV GGVARGL V
Sbjct: 61  FIAPGLIMMSVITNSYSNVASSFYSAKFQRNLEELMVAPVPHYVMIAGYVGGGVARGLCV 120

Query: 121 GAMVTAVSLLFVDLQVDHWGIIIATVFLTSVVFSLGGLINAVFAKTFDDISIVPTFVLTP 180
           G +VT V++ FVD+ + H G+++ TVFLTSV+FSLGGLINAVFAK+FDDISI+PTFVLTP
Sbjct: 121 GLIVTLVAMFFVDISLHHAGLVVMTVFLTSVLFSLGGLINAVFAKSFDDISIIPTFVLTP 180

Query: 181 LTYLGGVFYSISLLPEFWQSVSKINPIVYMVNAFRYGFLGVSDVDIMTSFAVLMAFVVAL 240
           LTYLGGVFYS+SLLP FWQ VS +NP+VYM+N FRYGFLG +D+ I  S  +++ F   L
Sbjct: 181 LTYLGGVFYSLSLLPSFWQGVSALNPVVYMINVFRYGFLGFADISIPLSIGIMVGFCAVL 240

Query: 241 YCVAHYLVTKGKGLRS 256
           + VA+YL+++G GLRS
Sbjct: 241 WGVAYYLISRGIGLRS 256