Pairwise Alignments

Query, 305 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., ABC transporter, ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  409 bits (1051), Expect = e-119
 Identities = 208/303 (68%), Positives = 250/303 (82%), Gaps = 1/303 (0%)

Query: 3   ALEIEQLRKTYAGGFEALKGISLQVKKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVT 62
           AL IE L+KTY GG EA+KGISL+V KGDF+ALLGPNGAGKSTTIGIISSLV K+SGKV 
Sbjct: 9   ALRIEGLKKTYKGGVEAVKGISLEVAKGDFFALLGPNGAGKSTTIGIISSLVQKSSGKVE 68

Query: 63  VFGYDLDSQLELAKQKLGLVPQEFNFNPFETVEQIVLQQAGYYGVPKALAKERAKKYLTQ 122
           VFG+D+D QLE AK  +GLVPQEFNFN FETV QIV+ QAGYYGVP+  A  RA+KYL+ 
Sbjct: 69  VFGHDIDRQLEAAKLCIGLVPQEFNFNQFETVLQIVVNQAGYYGVPRPEALLRAEKYLSA 128

Query: 123 LDLWEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAGVDIELRRSMWEFLKQIN 182
           LDLW+KR+  +R LSGGMKRRLMIARALMHEP+LLILDEPTAGVDIELRRSMW FL ++N
Sbjct: 129 LDLWDKRNSPSRQLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWSFLTELN 188

Query: 183 AQGVTIILTTHYLEEAEMLCRHIGIIQRGELIENTTMKSLLGKLHVETFVLDVDGNAPIA 242
            QGVTIILTTHYLEEAEMLCR+IGII +GEL+E T+MK LL KL++ETF+LD+  +    
Sbjct: 189 RQGVTIILTTHYLEEAEMLCRNIGIIDKGELVECTSMKKLLAKLNMETFILDLKQDVDAL 248

Query: 243 P-LQGVVKQQMVEGSLEIELEKSQGINHVFTQLTEQGVKVLSMRNKVNRLEELFVSIVNS 301
           P L G+  + +   +LE+++ K   +N +F QL+EQG++VLSMRNK NRLEELFV++V  
Sbjct: 249 PALDGIQCRLIDNHTLEVDIAKEHSLNQLFAQLSEQGIEVLSMRNKANRLEELFVALVEG 308

Query: 302 GKR 304
            K+
Sbjct: 309 AKQ 311