Pairwise Alignments

Query, 305 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  421 bits (1082), Expect = e-122
 Identities = 214/305 (70%), Positives = 256/305 (83%), Gaps = 1/305 (0%)

Query: 2   YALEIEQLRKTYAGGFEALKGISLQVKKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKV 61
           YAL I+ LRKTY GG EA+KGISL+V+ GDF+ALLGPNGAGKSTTIG+I SLV K+SGKV
Sbjct: 6   YALVIDSLRKTYKGGVEAVKGISLKVEAGDFFALLGPNGAGKSTTIGVICSLVQKSSGKV 65

Query: 62  TVFGYDLDSQLELAKQKLGLVPQEFNFNPFETVEQIVLQQAGYYGVPKALAKERAKKYLT 121
            VF +D+D+QLELAK  +GLVPQEFNFN FETV+QIV+ QAGY+GV + +A ERAKKYL+
Sbjct: 66  KVFEHDIDTQLELAKMSIGLVPQEFNFNQFETVQQIVVNQAGYFGVSREVAFERAKKYLS 125

Query: 122 QLDLWEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAGVDIELRRSMWEFLKQI 181
           QLDLW+KR+  +R LSGGMKRRLMIARALMHEP+LLILDEPTAGVDIELRRSMW FL  +
Sbjct: 126 QLDLWDKRNSPSRALSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLTDL 185

Query: 182 NAQGVTIILTTHYLEEAEMLCRHIGIIQRGELIENTTMKSLLGKLHVETFVLDVDGNAPI 241
           N QGVTIILTTHYLEEAEMLCR+IGII +GEL+E T+MKSLL +L++ETFV D+  +   
Sbjct: 186 NRQGVTIILTTHYLEEAEMLCRNIGIIDKGELVECTSMKSLLSRLNMETFVFDLKADINE 245

Query: 242 AP-LQGVVKQQMVEGSLEIELEKSQGINHVFTQLTEQGVKVLSMRNKVNRLEELFVSIVN 300
           AP L+G+  +     +LE+++EK+  IN VF QLTEQG++VLSMRNK NRLEELFV +V 
Sbjct: 246 APTLEGISCRLTDPHTLEVDVEKAHSINSVFAQLTEQGIEVLSMRNKANRLEELFVELVE 305

Query: 301 SGKRG 305
            GK G
Sbjct: 306 QGKGG 310