Pairwise Alignments

Query, 305 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  416 bits (1069), Expect = e-121
 Identities = 215/299 (71%), Positives = 253/299 (84%), Gaps = 1/299 (0%)

Query: 2   YALEIEQLRKTYAGGFEALKGISLQVKKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKV 61
           +AL +E L+KTY GG EA+KGISL V++GDF+ALLGPNGAGKSTTIGIISSLV KT+G V
Sbjct: 6   HALVLEGLKKTYKGGVEAVKGISLTVEQGDFFALLGPNGAGKSTTIGIISSLVQKTAGSV 65

Query: 62  TVFGYDLDSQLELAKQKLGLVPQEFNFNPFETVEQIVLQQAGYYGVPKALAKERAKKYLT 121
            VF +D+D QLE AK  +GLVPQEFNFN FETV QIV+ QAGYYGVPKA+A ERA+KYLT
Sbjct: 66  KVFDFDIDKQLEEAKLCIGLVPQEFNFNQFETVLQIVVNQAGYYGVPKAVALERAQKYLT 125

Query: 122 QLDLWEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAGVDIELRRSMWEFLKQI 181
           QLDLWEKR+ ++R LSGGMKRRLMIARALMHEP+LLILDEPTAGVDIELRRSMWEFLKQI
Sbjct: 126 QLDLWEKRNSQSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWEFLKQI 185

Query: 182 NAQGVTIILTTHYLEEAEMLCRHIGIIQRGELIENTTMKSLLGKLHVETFVLDVDGNAPI 241
           N QGVTIILTTHYLEEAEMLCR+IGII +G L+E T+MK+LL KL++ETF+LD+  +  +
Sbjct: 186 NQQGVTIILTTHYLEEAEMLCRNIGIIDKGVLVECTSMKALLSKLNLETFILDLRRDIYV 245

Query: 242 AP-LQGVVKQQMVEGSLEIELEKSQGINHVFTQLTEQGVKVLSMRNKVNRLEELFVSIV 299
           AP L G+V +     +LE+++ K   +N VFTQLT   V+VLSMRNK NRLEELFV +V
Sbjct: 246 APTLDGMVCRLTDPHTLEVDVAKEHNLNDVFTQLTAANVEVLSMRNKSNRLEELFVELV 304