Pairwise Alignments

Query, 305 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  226 bits (575), Expect = 7e-64
 Identities = 122/309 (39%), Positives = 191/309 (61%), Gaps = 10/309 (3%)

Query: 3   ALEIEQLRKTYAGGF-----EALKGISLQVKKGDFYALLGPNGAGKSTTIGIISSLVNKT 57
           A+EI  LRKTY         EALKG+ L +  G  + LLGPNGAGKST I I++ LV KT
Sbjct: 13  AIEITGLRKTYRAANGQPAKEALKGVDLTIPAGSIFGLLGPNGAGKSTLINILAGLVRKT 72

Query: 58  SGKVTVFGYDLDSQLELAKQKLGLVPQEFNFNPFETVEQIVLQQAGYYGVPKALAKERAK 117
           +G+V ++G+D D     ++  +G++PQE N +PF T    +  Q+G YGVP++  + R  
Sbjct: 73  AGQVRIWGFDQDVNPRQSRAAIGVMPQELNLDPFFTPRGALDMQSGLYGVPRS--EWRTD 130

Query: 118 KYLTQLDLWEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAGVDIELRRSMWEF 177
           + L  + L +K    +R+LSGGM+RRL++ +AL+H P +L+LDEPTAGVDIELR+ +W  
Sbjct: 131 EILALIGLSDKADAYSRSLSGGMRRRLLLGKALVHTPHVLVLDEPTAGVDIELRQMLWRN 190

Query: 178 LKQINAQGVTIILTTHYLEEAEMLCRHIGIIQRGELIENTTMKSLLGKLHVETFVLD-VD 236
           ++++N QG+TIILTTHYLEEAE +C  I II  G  I      +LL +L  +T V+   D
Sbjct: 191 VRKLNEQGMTIILTTHYLEEAEQMCDEIAIINHGAKIAQDKTPTLLSRLDAKTLVISPED 250

Query: 237 GNAPIAP-LQGVVKQQMVEGSLEIELEKSQ-GINHVFTQLTEQGVKVLSMRNKVNRLEEL 294
           G+    P + GV  +   +G+L     + Q  +  +   + + G+++  +  +   LE++
Sbjct: 251 GHDGTLPRIDGVQAEARPDGTLGFTYRRGQIPVETILQAVHDAGIRIRELATEEPDLEDV 310

Query: 295 FVSIVNSGK 303
           F+++ ++ +
Sbjct: 311 FLALTHNAQ 319