Pairwise Alignments

Query, 305 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3

 Score =  411 bits (1057), Expect = e-120
 Identities = 212/299 (70%), Positives = 252/299 (84%), Gaps = 1/299 (0%)

Query: 2   YALEIEQLRKTYAGGFEALKGISLQVKKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKV 61
           +AL +E L+KTY GG EA+KGISL V++GDF+ALLGPNGAGKSTTIGIISSLV KT+G V
Sbjct: 6   HALVLEGLKKTYKGGVEAVKGISLTVEQGDFFALLGPNGAGKSTTIGIISSLVQKTAGSV 65

Query: 62  TVFGYDLDSQLELAKQKLGLVPQEFNFNPFETVEQIVLQQAGYYGVPKALAKERAKKYLT 121
            VF +D+D QLE AK  +GLVPQEFNFN FETV QIV+ QAGYYGVPK +A ERA+KYL+
Sbjct: 66  QVFDFDIDKQLEEAKLCIGLVPQEFNFNQFETVLQIVVNQAGYYGVPKHIALERAEKYLS 125

Query: 122 QLDLWEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAGVDIELRRSMWEFLKQI 181
           QLDLW+KR+ ++R LSGGMKRRLMIARALMHEP+LLILDEPTAGVDIELRRSMWEFLKQI
Sbjct: 126 QLDLWDKRNSQSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWEFLKQI 185

Query: 182 NAQGVTIILTTHYLEEAEMLCRHIGIIQRGELIENTTMKSLLGKLHVETFVLDVDGNAPI 241
           N QGVTIILTTHYLEEAEMLCR+IGII +G L+E T+MK+LL KL++ETF+LD+  +  +
Sbjct: 186 NQQGVTIILTTHYLEEAEMLCRNIGIIDKGVLVECTSMKALLSKLNLETFILDLRRDIDV 245

Query: 242 AP-LQGVVKQQMVEGSLEIELEKSQGINHVFTQLTEQGVKVLSMRNKVNRLEELFVSIV 299
           AP L G+V +     +LE+++ K   +N VFTQLT   V+VLSMRNK NRLEELFV +V
Sbjct: 246 APTLNGMVCRLTDPHTLEVDVAKDHNLNDVFTQLTAAKVEVLSMRNKSNRLEELFVELV 304