Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., rRNA small subunit methyltransferase I from Pseudomonas fluorescens FW300-N2E2

 Score =  301 bits (772), Expect = 9e-87
 Identities = 155/277 (55%), Positives = 201/277 (72%), Gaps = 1/277 (0%)

Query: 9   NGAPILYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNISTKTFALHDH 68
           + A  LY+V TPIGNL DI+ RAL +L  V +IA EDTRH+ +LL HF IST   A H+H
Sbjct: 9   SAAGALYVVATPIGNLDDISARALRILQEVALIAAEDTRHSQRLLQHFGISTPLAACHEH 68

Query: 69  NEQQKAQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPCAVITA 128
           NE+ +    + +LL+G ++AL+SDAGTPLISDPGYHLV Q R AG+ VVP+PG CA+I A
Sbjct: 69  NERDEGSRFITRLLAGDNVALISDAGTPLISDPGYHLVRQARAAGISVVPVPGACALIAA 128

Query: 129 LSASGLPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQDMLDVLGG 188
           LSA+GLPSD F FEGFLPAK+  R+ +L  I +  RT IFYE+PHRI E LQDM  V G 
Sbjct: 129 LSAAGLPSDRFIFEGFLPAKAVGRRARLEAIKEEPRTLIFYEAPHRILECLQDMELVFGA 188

Query: 189 EREVVLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGY-RDAGEQQLPDEA 247
           ER  +LARELTKTFET++G+PLA+L  ++  D N+++GE V+LV G+     E  +  EA
Sbjct: 189 ERPALLARELTKTFETLKGLPLAQLRAFVESDSNQQRGECVVLVAGWTAPESEDAVSSEA 248

Query: 248 LRTLTILTKELPLKKAAALVAEIHQLKKNALYKWGLE 284
           +R L +L +E+PLK+AAAL A+I   +KN LY+  LE
Sbjct: 249 MRVLNLLLEEMPLKRAAALAAQITGERKNVLYQVALE 285