Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., rRNA small subunit methyltransferase I from Pseudomonas fluorescens FW300-N1B4

 Score =  296 bits (759), Expect = 3e-85
 Identities = 152/277 (54%), Positives = 200/277 (72%), Gaps = 1/277 (0%)

Query: 9   NGAPILYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNISTKTFALHDH 68
           + A  LY+V TPIGNL DI+ RAL +L  V +IA EDTRH+ +L+ HF I T   A H+H
Sbjct: 3   SAAGSLYVVATPIGNLDDISARALKILREVALIAAEDTRHSQRLMQHFGIPTPLAACHEH 62

Query: 69  NEQQKAQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPCAVITA 128
           NE+++    + +LL+G  +AL+SDAGTPLISDPGYHLV Q R AG+ VVP+PG CA+I A
Sbjct: 63  NEREEGNRFITRLLAGDDVALISDAGTPLISDPGYHLVRQARAAGINVVPVPGACALIAA 122

Query: 129 LSASGLPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQDMLDVLGG 188
           LSA+GLPSD F FEGFLPAK+  R+ +L  + +  RT IFYE+PHRI E LQDM  V G 
Sbjct: 123 LSAAGLPSDRFIFEGFLPAKAVGRRARLELVKEEPRTLIFYEAPHRILECLQDMELVFGA 182

Query: 189 EREVVLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGY-RDAGEQQLPDEA 247
           ER  +LARELTKTFET++G+PLAEL  ++  D N+++GE V+LV G+     E  +  EA
Sbjct: 183 ERPALLARELTKTFETLKGLPLAELREFVESDSNQQRGECVVLVAGWTAPETEDAVSSEA 242

Query: 248 LRTLTILTKELPLKKAAALVAEIHQLKKNALYKWGLE 284
           +R L +L +E+PLK+AAAL A+I   +KN LY+  L+
Sbjct: 243 MRILNLLLEEMPLKRAAALAAQITGERKNVLYQVALD 279