Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., probable S-adenosylmethionine-dependent methyltransferase, YraL family from Pseudomonas stutzeri RCH2

 Score =  308 bits (788), Expect = 1e-88
 Identities = 159/285 (55%), Positives = 204/285 (71%), Gaps = 1/285 (0%)

Query: 1   MTDNKTVPNGAPILYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNIST 60
           MT +    +G   LY+V TPIGNL DI+ RAL VL  V +IA EDTRH+ +LLAHF I T
Sbjct: 1   MTASDGANSGVGTLYVVATPIGNLEDISARALRVLKEVSLIAAEDTRHSSRLLAHFGIQT 60

Query: 61  KTFALHDHNEQQKAQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLP 120
              A H+HNE+++    + +L +G +IAL+SDAGTPLISDPGYHLV Q R AGV VVP+P
Sbjct: 61  PLAACHEHNEREEGGRFLGRLQAGENIALISDAGTPLISDPGYHLVRQARAAGVAVVPVP 120

Query: 121 GPCAVITALSASGLPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQ 180
           G CA+I ALSA+GLPSD F FEGFLPAK+ AR+ +L  + +  RT IFYE+PHRI ESL+
Sbjct: 121 GACALIAALSAAGLPSDRFIFEGFLPAKAAARRARLETLKEEPRTLIFYEAPHRILESLR 180

Query: 181 DMLDVLGGEREVVLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYR-DAG 239
           D  DV GG R  VL RELTKTFET++G+PL +L  W+  D N+++GE V+LV G+     
Sbjct: 181 DFEDVFGGGRVAVLGRELTKTFETLKGLPLGQLRAWVEADSNQQRGECVVLVEGWHAPQD 240

Query: 240 EQQLPDEALRTLTILTKELPLKKAAALVAEIHQLKKNALYKWGLE 284
           E  +  E+LR L +L  E+PLK+AAA+ AEI  ++KN LY+  LE
Sbjct: 241 ESAVSAESLRVLDLLLAEMPLKRAAAIAAEITGVRKNLLYQAALE 285