Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., Protein of unknown function UPF0011 from Pseudomonas syringae pv. syringae B728a

 Score =  302 bits (773), Expect = 7e-87
 Identities = 154/276 (55%), Positives = 200/276 (72%), Gaps = 1/276 (0%)

Query: 14  LYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNISTKTFALHDHNEQQK 73
           LY+V TPIGNL D++ RAL VL  V +IA EDTRH+ +L+ HF IST   A H+HNE+ +
Sbjct: 29  LYVVATPIGNLDDMSVRALKVLREVALIAAEDTRHSARLMQHFGISTPLAACHEHNERDE 88

Query: 74  AQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPCAVITALSASG 133
               + +LL+G  +AL+SDAGTPLISDPGYHLV Q R AGV VVP+PG CA+I ALSA+G
Sbjct: 89  GSRFITRLLAGDDVALISDAGTPLISDPGYHLVRQARAAGVPVVPVPGACALIAALSAAG 148

Query: 134 LPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQDMLDVLGGEREVV 193
           LPSD F FEGFLPAKS  RK +L  + +  RT I+YE+PHRI E LQDM  V G +R+ +
Sbjct: 149 LPSDRFIFEGFLPAKSAGRKARLERVREEPRTLIYYEAPHRILECLQDMELVFGADRQAL 208

Query: 194 LARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGEQQ-LPDEALRTLT 252
           LARE+TKTFET++G+PL EL  ++  D N+++GE V+LV G+    ++  + DEA R L 
Sbjct: 209 LAREITKTFETLKGLPLGELRAFVESDSNQQRGECVVLVAGWTPPDDEDVIGDEARRVLD 268

Query: 253 ILTKELPLKKAAALVAEIHQLKKNALYKWGLENLGE 288
           +L  E+PLK+AAAL AEI  ++KN LY+  LE   E
Sbjct: 269 LLLAEMPLKRAAALAAEITGVRKNLLYQVALEKQKE 304