Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Synechocystis sp000284455 PCC 6803

 Score =  230 bits (586), Expect = 3e-65
 Identities = 127/274 (46%), Positives = 171/274 (62%), Gaps = 4/274 (1%)

Query: 13  ILYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNISTKTFALHDHNEQQ 72
           ILY+V TPIGNLGD+T RA++ L +VD+IA EDTRHTGKLL HF I+T   + HDHN   
Sbjct: 3   ILYLVATPIGNLGDMTPRAVETLQTVDLIAAEDTRHTGKLLQHFQITTPQISYHDHNRHG 62

Query: 73  KAQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPCAVITALSAS 132
           + Q L+ KL +G +IALVSDAGTP ISDPG  LV  C +A ++V+P+PG  A+I AL +S
Sbjct: 63  RTQELLAKLQAGQNIALVSDAGTPGISDPGQELVAACGEANIEVIPIPGATALIAALISS 122

Query: 133 GLPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQDMLDVLGGEREV 192
           GL +D F FEGFL  K++ R+  L  +A+  RT I YE+PHR+  +L D+   LG ER +
Sbjct: 123 GLATDRFVFEGFLSTKNRPRQQLLQSLAQEERTIILYEAPHRLLATLTDLQTFLGQERSL 182

Query: 193 VLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGEQQLPDEALR--T 250
            +ARELTK  E      L   I +  E  N  KGE  L++ G          +E LR   
Sbjct: 183 TVARELTKYHEQFWRGTLQTAIAYFTE--NTPKGEFCLVIAGATPEDRPSFSEENLRDEL 240

Query: 251 LTILTKELPLKKAAALVAEIHQLKKNALYKWGLE 284
            +++ K L   +A+  +AE  +L +  LY+  LE
Sbjct: 241 RSLMAKGLTRSQASRQLAEETKLPRRQLYQLSLE 274