Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  229 bits (583), Expect = 8e-65
 Identities = 129/268 (48%), Positives = 168/268 (62%), Gaps = 2/268 (0%)

Query: 12  PILYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNISTKTFALHDHNEQ 71
           P LY+V TPIGNLGDIT RAL+ LA  D++A EDTR T  LL  + I  +  A H+HN  
Sbjct: 32  PCLYLVATPIGNLGDITLRALETLAGADVLACEDTRVTRVLLDRYGIVNRPTAYHEHNAA 91

Query: 72  QKAQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPCAVITALSA 131
           +    L+  L +G S+ALVSDAGTPL+SDPGY L  Q  +AG +VVP+PGP A + AL  
Sbjct: 92  EAGPRLLAALGNGKSVALVSDAGTPLVSDPGYRLAQQAVEAGYRVVPIPGPSAPLAALVG 151

Query: 132 SGLPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQDMLDVLGGERE 191
           SGLPSD+F F GFLP K KA++D+L E+A V  T IF+ESPHRI  ++    +VLG +R 
Sbjct: 152 SGLPSDAFLFAGFLPVKDKAKRDRLAELAAVPATLIFFESPHRIAATVTAAAEVLGADRR 211

Query: 192 VVLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGEQQLPDEALRTL 251
             + RELTKTFE  +   L EL   I ++    +GE+VL+V G  +A  Q    +    L
Sbjct: 212 AAVCRELTKTFEEFRRGTLGELAA-IYDESANVRGEIVLVV-GPPEAKPQPEAADVDALL 269

Query: 252 TILTKELPLKKAAALVAEIHQLKKNALY 279
             L ++LP+ KAA   A    L +  LY
Sbjct: 270 KELARDLPMGKAATEAARRTGLARKELY 297