Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., Protein of unknown function UPF0011 (NCBI) from Rhodospirillum rubrum S1H

 Score =  184 bits (468), Expect = 2e-51
 Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 6/280 (2%)

Query: 11  APILYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNISTKTFALHDHNE 70
           AP L++V TPIGN+GDI+ RA+D LA  D++A EDTR TG LL    +S K    H+HN 
Sbjct: 20  APGLHLVGTPIGNMGDISARAIDALAGADLVACEDTRVTGGLLHRLGVSAKLTPYHEHNA 79

Query: 71  QQKAQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPCAVITALS 130
                 L+ KL  G +I LVSDAG PL+SDPGY LV  C +AG++V  +PGP AV+TAL+
Sbjct: 80  DAARPALLAKLAEGAAIVLVSDAGMPLVSDPGYRLVRACHEAGIRVTAVPGPSAVLTALA 139

Query: 131 ASGLPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQDMLDVLGGER 190
            +GLP+D F F GF P K         E+A+V  T + +E   R+  +L  +   L G+R
Sbjct: 140 LAGLPTDRFQFVGFPPPKPGKLGTFCAELAEVRATLVLFEGVSRLDRTLAALAKAL-GDR 198

Query: 191 EVVLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGEQQ--LPDEAL 248
           E  + RELTK  E ++   L  L    AE     KGE V+++     A      + D+ L
Sbjct: 199 EAAVCRELTKLHEEVRRGTLDTLAAHYAE-AGPPKGEAVIVIAPPDAAAPPSAGVLDDRL 257

Query: 249 RTLTILTKELPLKKAAALVAEIHQLKKNALYKWGLENLGE 288
           R L  L     ++ AA  +A    + + ALY+  LE  G+
Sbjct: 258 RQL--LDAGESVRSAAERLAAESGVARRALYRRALELAGK 295