Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Rahnella sp. WP5

 Score =  362 bits (930), Expect = e-105
 Identities = 183/274 (66%), Positives = 221/274 (80%), Gaps = 1/274 (0%)

Query: 11  APILYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNISTKTFALHDHNE 70
           A  LYIVPTPIGNLGDITQRAL VL SVD+IA EDTRHTG LL HF I+ K + LHDHNE
Sbjct: 11  ASTLYIVPTPIGNLGDITQRALAVLNSVDLIAAEDTRHTGLLLQHFAITAKMYPLHDHNE 70

Query: 71  QQKAQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPCAVITALS 130
           QQKA+ L+ KL +G +IALVSDAGTPLI+DPGYHLV +CR+AG++VVPLPG CA ITAL 
Sbjct: 71  QQKAEHLLAKLQAGQTIALVSDAGTPLINDPGYHLVRRCREAGIRVVPLPGACAAITALC 130

Query: 131 ASGLPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQDMLDVLGGER 190
           A+GLPSD F +EGFLPAK+K+RKD L  + +  RT IFYES HR+ +SLQDM++V G +R
Sbjct: 131 AAGLPSDRFCYEGFLPAKTKSRKDTLQALIEEPRTLIFYESTHRLLDSLQDMVEVWGPDR 190

Query: 191 EVVLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGEQQLPDEALRT 250
            VVLARELTKT+E I G P+ EL+ W+ E + R++GEMVL+V G++    + LP EALRT
Sbjct: 191 YVVLARELTKTWENIHGAPVGELLAWVQEVETRRRGEMVLIVEGHK-VDTEALPAEALRT 249

Query: 251 LTILTKELPLKKAAALVAEIHQLKKNALYKWGLE 284
           L +L KELPLKKAAAL AEIH +KKNALYK+ L+
Sbjct: 250 LALLQKELPLKKAAALAAEIHGVKKNALYKYALD 283