Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., probable S-adenosylmethionine-dependent methyltransferase, YraL family from Phaeobacter inhibens DSM 17395

 Score =  187 bits (474), Expect = 3e-52
 Identities = 121/281 (43%), Positives = 159/281 (56%), Gaps = 11/281 (3%)

Query: 7   VPNGAPILYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNI---STKTF 63
           +P+G   LY V TPIG   DIT RALDVLAS DMIA EDTR   KL+    +     +  
Sbjct: 8   LPSG---LYFVATPIGTARDITLRALDVLASADMIAAEDTRSLRKLMEIHGVPLNGRQIV 64

Query: 64  ALHDHNEQQKAQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPC 123
           A HDH+       L+  L  G S+A  S+AG PLI+DPGY L     +AG  V   PG  
Sbjct: 65  AYHDHSGAGARARLLAALEEGQSVAYASEAGMPLIADPGYDLSRAAAEAGHLVTVAPGAS 124

Query: 124 AVITALSASGLPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQDML 183
           A + AL+ +GLP+D+F F GFLP  S AR+ +L E+A V  T +FYESP RI  SL+DM 
Sbjct: 125 AALAALTLAGLPTDAFFFAGFLPNASGARRKRLEELAAVPGTLVFYESPKRIAASLRDMA 184

Query: 184 DVLGGEREVVLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGEQQL 243
            VL G+R   L RE+TK FE ++   L  L   +  D    KGE+V+LV   R  G    
Sbjct: 185 AVL-GDRPAALCREITKKFEEVRRDSLLTLAEGL--DQAPVKGEIVVLVD--RARGVSVS 239

Query: 244 PDEALRTLTILTKELPLKKAAALVAEIHQLKKNALYKWGLE 284
             +    L    K+  +K AA++VAE+H L +  +Y+  L+
Sbjct: 240 DGDLDSDLRAALKDNSVKDAASIVAEMHNLPRRKIYQLALD 280