Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 237 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  187 bits (475), Expect = 2e-52
 Identities = 99/221 (44%), Positives = 139/221 (62%), Gaps = 3/221 (1%)

Query: 14  LYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNISTKTFALHDHNEQQK 73
           L++VPTPIGNL D+T RA+ +L   D+I  EDTR +  +L HF I  + F+ H HNE + 
Sbjct: 5   LFLVPTPIGNLEDMTFRAIRILKECDLILAEDTRTSAPMLKHFGIDKRVFSHHQHNEHKA 64

Query: 74  AQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPCAVITALSASG 133
              ++  L  G  IAL+SDAGTP ISDPG+ LV +  +  + V  LPG  A + AL  SG
Sbjct: 65  TSEIIKFLNEGQKIALISDAGTPAISDPGFFLVREAIKNDIAVECLPGATAFVPALVNSG 124

Query: 134 LPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQDMLDVLGGEREVV 193
           LP+D+F FEGFLP K K R+ K  ++A+  RT I YESPHR+ ++L++    LG +R+  
Sbjct: 125 LPADAFCFEGFLPVK-KGRQTKFKKLAEEDRTIILYESPHRLLKTLEEFAQYLGADRQAS 183

Query: 194 LARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHG 234
           ++RELTK FE      L E+ +    ++N  KGE V+ + G
Sbjct: 184 VSRELTKMFEETVRGTLVEIKSHF--ENNTLKGEFVICIAG 222