Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., Conserved protein from Mycobacterium tuberculosis H37Rv

 Score =  174 bits (441), Expect = 2e-48
 Identities = 104/260 (40%), Positives = 142/260 (54%), Gaps = 7/260 (2%)

Query: 14  LYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNIST--KTFALHDHNEQ 71
           L +  TP+G   D + R    LA+ D++A EDTR   KL    +I    +  +L D  E 
Sbjct: 6   LLLGATPLGQPSDASPRLAAALATADVVAAEDTRRVRKLAKALDIRIGGRVVSLFDRVEA 65

Query: 72  QKAQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPCAVITALSA 131
            +   L+D + +G ++ +VSDAGTP+ISDPGY LV  C  AGV V  LPGP AV TAL  
Sbjct: 66  LRVTALLDAINNGATVLVVSDAGTPVISDPGYRLVAACIDAGVSVTCLPGPSAVTTALVM 125

Query: 132 SGLPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQDMLDVLGGERE 191
           SGLP++ F FEGF P K  AR+  L E+A+  RTC+F+ESP R+   L D ++ LGG R 
Sbjct: 126 SGLPAEKFCFEGFAPRKGAARRAWLAELAEERRTCVFFESPRRLAACLNDAVEQLGGARP 185

Query: 192 VVLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGEQQLPDEALRTL 251
             + RELTK  E +    L EL  W A       GE+ ++V G   A   +L     +  
Sbjct: 186 AAICRELTKVHEEVVRGSLDELAIWAA---GGVLGEITVVVAG--AAPHAELSSLIAQVE 240

Query: 252 TILTKELPLKKAAALVAEIH 271
             +   + +K A + VA  H
Sbjct: 241 EFVAAGIRVKDACSEVAAAH 260