Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., hypothetical methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  366 bits (939), Expect = e-106
 Identities = 183/273 (67%), Positives = 226/273 (82%), Gaps = 1/273 (0%)

Query: 14  LYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNISTKTFALHDHNEQQK 73
           LYIVPTPIGNLGD++ RA+DVL+ V +IA EDTRH+GKLL+HF ISTKT ALHDHNE+ +
Sbjct: 7   LYIVPTPIGNLGDMSPRAIDVLSQVALIACEDTRHSGKLLSHFGISTKTIALHDHNERAR 66

Query: 74  AQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPCAVITALSASG 133
           AQ +VD+L +G SIAL+SDAGTPLISDPGYHLV+  RQ+G KV+PLPGPCA ITALSASG
Sbjct: 67  AQWIVDQLAAGQSIALISDAGTPLISDPGYHLVSHVRQSGFKVIPLPGPCAAITALSASG 126

Query: 134 LPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQDMLDVLGGEREVV 193
           LPSD FSFEGFLP+K KAR DKLLE+ +  RT IFYESPHRI  SL  M  VLG +R+VV
Sbjct: 127 LPSDRFSFEGFLPSKEKARADKLLELKEDPRTLIFYESPHRIEHSLTTMAQVLGDDRQVV 186

Query: 194 LARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDA-GEQQLPDEALRTLT 252
           +ARE+TKTFET    P+AE++  ++ D N++KGE+VL+VHG+R A  ++ +P  A+ TL 
Sbjct: 187 MAREVTKTFETFLSGPVAEVLATVSSDLNQQKGEIVLMVHGHRAAEDDEAIPTVAINTLK 246

Query: 253 ILTKELPLKKAAALVAEIHQLKKNALYKWGLEN 285
           +L +ELPLKKAAA+ A+IH LKKNALYK+GLE+
Sbjct: 247 LLCEELPLKKAAAIAAQIHGLKKNALYKFGLES 279