Pairwise Alignments

Query, 288 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., 16S rRNA methyltransferase from Burkholderia phytofirmans PsJN

 Score =  235 bits (600), Expect = 8e-67
 Identities = 132/266 (49%), Positives = 172/266 (64%), Gaps = 2/266 (0%)

Query: 14  LYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNISTKTFALHDHNEQQK 73
           LY+V TPIGN+ D+T RAL VL  VD IA EDTR+TG+LLA + IS    A+H HNE+  
Sbjct: 18  LYVVATPIGNIADVTLRALHVLGLVDRIAAEDTRNTGQLLARYGISKPLVAVHQHNERAA 77

Query: 74  AQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPCAVITALSASG 133
           A  L++ L +G  +A VSDAGTP ISDPG  LV   R+AG  V+PLPG  A+ TALS +G
Sbjct: 78  ALRLIEHLQAGERVAYVSDAGTPGISDPGAKLVDAVREAGFPVIPLPGASALATALSVAG 137

Query: 134 LPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQDMLDVLGGEREVV 193
               +FSF GFLP K+KAR   L  +A      +FYE+PHRI E++Q + D  GGER+++
Sbjct: 138 DWVATFSFLGFLPPKAKARAATLQPLATHPHAMVFYEAPHRIVETVQALADAFGGERKLL 197

Query: 194 LARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGEQQLPDEALRTLTI 253
           +ARELTK  E +    LAE  TW+A D NR++GE VL+V G +     +   +AL  L I
Sbjct: 198 IARELTKLHEALHRGTLAEGPTWLAADPNRQRGEFVLVVEGAQPETAGEHDHDAL--LGI 255

Query: 254 LTKELPLKKAAALVAEIHQLKKNALY 279
           L +EL +  AA + A I    +NALY
Sbjct: 256 LLEELTVSSAAKVAAAITGASRNALY 281